Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00847 ATGGCTCATACACTTAAATGTGCATTCTCTCATATACTCATCCTTGTAGGTTCACTCTCAATATTACTAGTGACCCCTTCCTCTTGTTTTAGTCCCAACAAAGTTGTTAATGTTACTTCATCTAATTCTAATTGGTCACCTTCAGTGGCCACTTGGTATGGACCTCCCACCGGAGATGGAAGTGAAGGTGGTGCTTGTGGATATGGAAATGCTGTTGGACAACCTCCATTATCTTCAATGATATCAGCCGGAAGCCCTCTCATCTATCAATCGGGCAAAGGCTGTGCCTTCCACGTCGACTCTAAATCTAACCCATATTATTTTGCTACCGCGGTTGAATATGAAAATGGGGATGGTGATCTTAAAAAAGTTGAACTTATGGAAGCATTTGGCAACACTTGGGTTACAATGCAACAATCATGGGGTGCTGTTTGGAAATATAATAAACAGTCACTACTAAGAGCGCCATTTTCTATTAGGCTAACCACAATTGAGTCTGGGAAGATATTTGTAGCAAAGAATGTGATCCCGACGGGTTGGAAGCCTGGTCAGACTTATAGAGCACTTGGAAATTTTATTTAA 582 0.4124 MAHTLKCAFSHILILVGSLSILLVTPSSCFSPNKVVNVTSSNSNWSPSVATWYGPPTGDGSEGGACGYGNAVGQPPLSSMISAGSPLIYQSGKGCAFHVDSKSNPYYFATAVEYENGDGDLKKVELMEAFGNTWVTMQQSWGAVWKYNKQSLLRAPFSIRLTTIESGKIFVAKNVIPTGWKPGQTYRALGNFI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00847 193 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 63 95 IPR007112 -
Car03g00847 193 PANTHER EXPANSIN-B3 96 192 - -
Car03g00847 193 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Car03g00847 193 PRINTS Expansin/Lol pI family signature 85 103 IPR007118 GO:0005576
Car03g00847 193 PRINTS Expansin/Lol pI family signature 44 59 IPR007118 GO:0005576
Car03g00847 193 PANTHER EXPANSIN-B2-RELATED 96 192 - -
Car03g00847 193 SUPERFAMILY Barwin-like endoglucanases 38 95 IPR036908 -
Car03g00847 193 Pfam Expansin C-terminal domain 96 177 IPR007117 -
Car03g00847 193 SUPERFAMILY PHL pollen allergen 94 187 IPR036749 -
Car03g00847 193 PANTHER EXPANSIN-B3 19 95 - -
Car03g00847 193 Gene3D - 89 192 IPR036749 -
Car03g00847 193 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 106 188 IPR007117 -
Car03g00847 193 PANTHER EXPANSIN-B2-RELATED 19 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00847 Car-Chr3 45154459 45155778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00847 19 95 Expansin Gene Family AT2G45110 45.455 2.79e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00847 - - cam:101502552 373.244