Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00842 ATGGCAGAAGCATTACTATTCAATTACCTTTTACTAATAGGGAAACATGGCTTTACTAACTTGGTTGTAGCATTGCGTGCTGACATGGATGTTTCCCTTCTTCATGTGTGGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAAATCTGAAGAAAGTTCGAAGATTGTAGTTGGCAAAATAATTAGGTCTCCTAGACCAGTGTTTGTCTCCAAGTCATCCTGTACTTCTGAGCTGCCCATCACTTTCCAAAAAAAGAGACGCAGGAAGAAAAGAAACAAGTCATCAAAAAGGGTCAGCAGCTCCAATTATTCCAAGAGTGCTTCTGTGCCTGTTCGGTTGCACAAGTTAGTTTTTGAGGAAAATGGATTGCCTGATGGAACTGAAGTAGCTTATTATGCACGCGGACAGAAATTGCTTGAAGGCTTCAAAAAGGGCTCTGGAATTGTTTGTAGATGCTGCAACACTGAGAGGGAAAAATTTGTGGCCTACAATGTCAATGCTTGGGCTGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAACAGATCTCCAAGAGATGCATCCGCATAGTCAAAGACATTGACGCTGAGCTTAGTGGGTGTGCTTTATGCAGGGGTGTTGACTTCAGCAGATCTGGCTTTGGTCCACGCACGATAATACTCTGTGATCAGGTATGCACTCTAGTATTGATGTCCCTACCAAAGGCCTCTCTGAGATGGAGGCTTCTTAATGGAAAAACCGCTTCTCCTGAAACTAGACCATTGCTTTTGGAGGCTGTCTCTATCTTTCATGAATGCTTCGATCCTATTGTAGACGCAGCTAGCAGACGTGACCTTATTCCAGCAATGGTTTATGGAAAGAATGTGCGGGGTCAGGAGTTTGGAGGAATGTATTGTGCATTACTAATAGTCAATTCATCTGTGGTATCTGCGGGCATGCTTCGAATCTTGGGCACTGATATTGCTGAACTTCCTTTAGTTGCAACAAGTAACAGTCACCATGGGAAGGGCTACTTCCAGACACTTTTCTCCTGCATTGAGAGGCTCTTGGCTTTCATGAAAGTAAAGAACCTTGTGCTACCAGCTGCAGAAGAAGCACAGTCCATATGGACAGATAAATTCGGCCTTAGCAAGATGAAACCAGAACAGCTTACCAACTACAGAAAGAACTGCAGTCAGTTTGTGAACTTCCAAGGGACAAATATGCTTCATAAAATGGTGCCTCCATGTCGAGTCATCAATAATCAACCTAACAAATTTTTATCTAGAAAAAGTCAGTCATGA 1287 0.4204 MAEALLFNYLLLIGKHGFTNLVVALRADMDVSLLHVWKXXXXXXXXXXRKSEESSKIVVGKIIRSPRPVFVSKSSCTSELPITFQKKRRRKKRNKSSKRVSSSNYSKSASVPVRLHKLVFEENGLPDGTEVAYYARGQKLLEGFKKGSGIVCRCCNTEREKFVAYNVNAWAAGRVEGVDPIEQISKRCIRIVKDIDAELSGCALCRGVDFSRSGFGPRTIILCDQVCTLVLMSLPKASLRWRLLNGKTASPETRPLLLEAVSIFHECFDPIVDAASRRDLIPAMVYGKNVRGQEFGGMYCALLIVNSSVVSAGMLRILGTDIAELPLVATSNSHHGKGYFQTLFSCIERLLAFMKVKNLVLPAAEEAQSIWTDKFGLSKMKPEQLTNYRKNCSQFVNFQGTNMLHKMVPPCRVINNQPNKFLSRKSQS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00842 428 PANTHER AUTOIMMUNE REGULATOR 237 414 - -
Car03g00842 428 PANTHER AUTOIMMUNE REGULATOR 55 158 - -
Car03g00842 428 PANTHER AUTOIMMUNE REGULATOR 158 225 - -
Car03g00842 428 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 291 371 IPR016181 -
Car03g00842 428 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 55 158 - -
Car03g00842 428 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 237 414 - -
Car03g00842 428 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 158 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00842 Car-Chr3 44839698 44853001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00842 152 415 PHD Transcription Factor Family AT2G36720 43.731 9.28e-87 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00842 - - cam:101515204 546.199