Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00841 ATGAAATTCAACAGAACCCTCTTTTGGCTCTCTGGCTTTGTCATATTTCTCTTTTCCATCATTGTTGTTCATTGCACCACGCCACCTTCCAACTCCTCTTGCACTTCCATTAATAATTCTCAAGGTAGTTTCAATTTTCATTTTGGCATATTAACCAAGATTATAAAGCTCAGTGGGGTTCAAGATTTTGTGTCTTTGCTAATAACAAGTATTGCGAGTAGGAGACATCATCATAGGAAGTGGCATAAGGAAAAATGTGACAAGACAAAATGGGCTTCCAATATAATTTTATATTATAATGCGTCTCTTGTTTTCACGGTTGACTTAAAGGGTTTTGCTAACTTCAGCAGTGTGCAGAAAGCAGTTGACGCTGTTCCTGAATCCAGCTCTGATACCACTATTATCTTAATTAATTCTGGTACATACAGAGAGAAGGTAGTGGTCGAAGCCAACAAAACAAACTTAGTACTACAAGGTCAAGGGTATCTTAATACAATCATAGAATGGAATGACACTGCAAATTCTACTGGTGGGACTTCCTATAGCTACTCGTTTGGCGTCTTTGCTTCTAAGTTTACTGCTTACAACATTAGCTTTAAGAACAATGCTCCGACAGCATCACCAGGAGAGGTTGGGGCACAGGCAGTGGCATTGCGAGTTAGCGGTGATCAAACCGCATTCTATGGATGTGGATTCTATGGTGCACAAGACACACTCAATGATGACGCTGGAAGACATTATTTTAAGGATTGTTTCATCCAAGGATCCATTGATTTCATATTTGGAAATGCAAGATCACTTTATGAGGATTGTACCATAAAGTCAATAGCTAAACAAGATACGGTTGGGGTTGATGGGTCTATCACAGCTCAAGGTAGACAATCATTGAAGGAACAAACAGGTTTTTCATTTGTGAATTGCAACATTGTTGGAAGTGGAAAAGTTTGGCTTGGAAGAGCTTGGGGAACATTTGCCACAGTTGTTTTCTCAACAACAAACATGTCTGATGTTGTAGCTGCTGAGGGATGGAATGATTGGAGAGATCCATCTAGAGACCAGAGTGTCTTCTTCGGGGAGTACCATTGTATAGGACCTGGAGCAAATTATACATCTAGAGTCTTTTATGCTAGGCAACTTAAAGATTATGAAGCAATATCCTATATGAATGTATCATACATTGATGGGAATGATTGGCTTCTTAACTACACTATTTAG 1215 0.3918 MKFNRTLFWLSGFVIFLFSIIVVHCTTPPSNSSCTSINNSQGSFNFHFGILTKIIKLSGVQDFVSLLITSIASRRHHHRKWHKEKCDKTKWASNIILYYNASLVFTVDLKGFANFSSVQKAVDAVPESSSDTTIILINSGTYREKVVVEANKTNLVLQGQGYLNTIIEWNDTANSTGGTSYSYSFGVFASKFTAYNISFKNNAPTASPGEVGAQAVALRVSGDQTAFYGCGFYGAQDTLNDDAGRHYFKDCFIQGSIDFIFGNARSLYEDCTIKSIAKQDTVGVDGSITAQGRQSLKEQTGFSFVNCNIVGSGKVWLGRAWGTFATVVFSTTNMSDVVAAEGWNDWRDPSRDQSVFFGEYHCIGPGANYTSRVFYARQLKDYEAISYMNVSYIDGNDWLLNYTI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00841 404 Gene3D - 100 404 IPR012334 -
Car03g00841 404 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 402 - -
Car03g00841 404 ProSitePatterns Pectinesterase signature 2. 253 262 IPR033131 -
Car03g00841 404 PANTHER PECTINESTERASE 14-RELATED 11 402 - -
Car03g00841 404 SUPERFAMILY Pectin lyase-like 101 399 IPR011050 -
Car03g00841 404 Pfam Pectinesterase 107 396 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00841 Car-Chr3 44834738 44837292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00841 105 399 Carbohydrate Esterase AT1G05310 57.047 1.82e-120 353