Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00832 atgtctgaagaGGGAAGTCATGTTGAAGCTGAAGGTGAATGGAGACAACATTGGGTAGGGTTTCTGGAGAAAAGGTTATACCCAAGTGGCAAATTCTTTGATCCTCTTGGTTTAGCCAGTGATCCTGAAAAGAAAGAAAGACTTCAATTGGTAGAGATTAAACATTCTCGCTTGGCTATGGTTGTGCTCCTCATCTTTGTAATCTAA 207 0.3865 MSEEGSHVEAEGEWRQHWVGFLEKRLYPSGKFFDPLGLASDPEKKERLQLVEIKHSRLAMVVLLIFVI 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00832 68 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 68 IPR001344 GO:0009765|GO:0016020
Car03g00832 68 SUPERFAMILY Chlorophyll a-b binding protein 16 68 - -
Car03g00832 68 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 23 68 - -
Car03g00832 68 Gene3D Chlorophyll a/b binding protein domain 4 68 - -
Car03g00832 68 Pfam Chlorophyll A-B binding protein 22 68 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00832 Car-Chr3 44579408 44581619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00832 23 68 Chloroplast and Mitochondria Gene Families AT5G01530 73.913 5.70e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00832 K08915 - gmx:100820335 80.1073