Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00823 ATGGAGTATGCATCCAAATTTGTAGAAAGAGCTATCGATGTTGTGTTGGACTTGACTATTCGGCATGTGGGTTACATCTTCTATTACAAGGAAAATGTCAGTGAACTAAACGTTCTGGTTGAGAAGCTAAGACTTGAACGAGATAGGCTGGAACACGAAGTAGATGAAGCTAAGGATAATCTAGGAATAATCGAAAGTGATGTTAATGTTTGGCTTCAAAAAGTGGATAAAACTAGAACTGAAACAGAGGAGTTTCAAAATGAAGAAGGTCACATAAAGACAAGGTGTTCCAGTGGTTTATTTCATTACTTGAGGAACAGGGATAGACTAGGCAGAAAAGCAAAGAAGATGGCAGTGGATGTCAAGTTATTAATAGATGAGTCAAAGTTTGATGGAGTTTCCTATCAGCAAAAGCCAACATCTATGCATGCTGCTTTGTTTAATGCTGGCTATGTAGAATTTGGTTCCCGAAAATATACAATTGAAAAGATAATGAAAAAACTAGAAGATTCTACAGTGAGAATGATTGGAGTGCACGGGCCAGGTGGTGTGGGTAAGAGCACTTTAATCAAAGAAATTGTTAAGAAAGCTCAAGACAAGAAGTTGTTCAATGTGGTAGTTATTGTAGAAATAACTGACAATCCCAACCTGCAGAAAATCCAGGAAGAAATTGCTTACATGTTAGGATTAACATTGGAAGGGGTAGGCGAGACTGTGAGAGCAGATCGTCTAAGGAGGAGGTTACAGAAAGAGAAGGAGAACACCCTTGTCGTCATGGATGACCTTTGGGACAGAATAGACTTGAATAAGATAGGAATTCCATTTGATGATGATATGGATGATGATTCAAGCCATATGACTATTGATGTAATGAAGGATCCTAACTTCAAAATGGTGAAAAAAGGAAGAACTGTTGGTGATTATAAGGGTTGCAAAATTTTGTTAACTTCGAGAGATAAAATAGTATTGTCTGGTAAAATGGAAGTCAAGTCAGTTATATGTGTGAGGGAATTAGATGATAAGGAATCTCTAATGTTGTTTAAGGAGGTGGCTGGAATACCTGATGAAATGTCCACATTTAAACAGGAGATTGTAAAAAAGTATTGTGCAGGGCTACCCATGGCAATTGTTACAGTTGGAAGGGCATTAAGAAATAAGAGCGAGTTAGTGTGGGAAGCCACACTCGAAAAACATAAAAAAGAGGAACTGGGTGAAGTGCAGAAATCTATGGAGATTTCTGTAAAGATGAGTTATGATCATCTAGAAAGTGTGGAGCTCCGGTCTATTTTCTTACTTTGGGCTCAAATGGGTCATCAACAATTAATTATGGACTTGGTGAAGTATTGCTTTGGATTGGGTATACTTGAAGGGGTCTATACGCTAAGGGAAGCTCGTGATAGAGTATATACATCAATCCAAAAGCTAAAAGACTCAAGTTTGATGTTGGATGGTAGTTCCAATGATCATTTCAGTATGCATGATATGGTTCAAGATGCTGCTTTGTCTATAGCACACAAGGAGCAAAATGTATTTGCTTTGAGAAATGGCAATTTAGATGACTGGCCGGACAAAGATGAACTCGAGAGGTGCAGTGCTATCTCTATACGCAACTGTGATATCATTGATGAGCTTCCTAAAGTTATAAATTGTCCTCAACTTAAATTCTTCCAAATTGACAGTGATGATCCTTCTTTGAAAATACCTGAGAAGTTTTTTGAAGGAATGGAAAAACTCAGAGTATTAATATTGACTGGGTTTCTTTTACCATGCTTACCATCTTCGATTAAATGCCTATTAAACCTCAGAATGCTTTGTTTGGAGCGGTGTATTCTGGTTGACAACTTATCCATCATAGGAGAGCTGAAAAAATTAAGAATTCTCAGCTTTTCTGGATCTCAAATTGAAAACTTGCCAGCTGAGATAGGGTGTTTAGATAAGCTACAGTTATTTGACATCAGTGACGATTCCATAATGAAGGTGGTTCCGCCAAATTTTATATCAAGGTTGACTTGTTTAGAAGAGTTGTATATAAGAAAGAGCTTGATCAAAATGGAGGAAGATGGAGAGCCAAACCAAAGTCAAATTTCATTTCTTTCTCAGTTAAAACATTTGCATCAATTGAGAGTTGTAGACTTATGCATCCCAAGTACTGCAGTTTTGCCTAGGGACTTATTCTTTGACAGGTTAATTGATTACAAAATTGTGATTGGAGACTTCAAGATGTTTTCAGTTGGAGGTTTTAGGATGCCTAATAAGTATGAAGCGTTAAGATCCTTGGCATTGCAGCTAACAAACGGCACTGACATTCACTCCCAGAAAGGGATAAAGTTGTTGTTCAGAAGAGTTGAAAATTTGGTGTTGGGAGAGCTAAGTGGAGTTCAAAATGCTTTTTATGAATTGAATTTGGATGGATTTCCAGATCTTAAAATGGAGCTGGGAGAGCTAAGTGGAGTTCAAAATGCTATTTATCCATCATAA 2478 0.3741 MEYASKFVERAIDVVLDLTIRHVGYIFYYKENVSELNVLVEKLRLERDRLEHEVDEAKDNLGIIESDVNVWLQKVDKTRTETEEFQNEEGHIKTRCSSGLFHYLRNRDRLGRKAKKMAVDVKLLIDESKFDGVSYQQKPTSMHAALFNAGYVEFGSRKYTIEKIMKKLEDSTVRMIGVHGPGGVGKSTLIKEIVKKAQDKKLFNVVVIVEITDNPNLQKIQEEIAYMLGLTLEGVGETVRADRLRRRLQKEKENTLVVMDDLWDRIDLNKIGIPFDDDMDDDSSHMTIDVMKDPNFKMVKKGRTVGDYKGCKILLTSRDKIVLSGKMEVKSVICVRELDDKESLMLFKEVAGIPDEMSTFKQEIVKKYCAGLPMAIVTVGRALRNKSELVWEATLEKHKKEELGEVQKSMEISVKMSYDHLESVELRSIFLLWAQMGHQQLIMDLVKYCFGLGILEGVYTLREARDRVYTSIQKLKDSSLMLDGSSNDHFSMHDMVQDAALSIAHKEQNVFALRNGNLDDWPDKDELERCSAISIRNCDIIDELPKVINCPQLKFFQIDSDDPSLKIPEKFFEGMEKLRVLILTGFLLPCLPSSIKCLLNLRMLCLERCILVDNLSIIGELKKLRILSFSGSQIENLPAEIGCLDKLQLFDISDDSIMKVVPPNFISRLTCLEELYIRKSLIKMEEDGEPNQSQISFLSQLKHLHQLRVVDLCIPSTAVLPRDLFFDRLIDYKIVIGDFKMFSVGGFRMPNKYEALRSLALQLTNGTDIHSQKGIKLLFRRVENLVLGELSGVQNAFYELNLDGFPDLKMELGELSGVQNAIYPS 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00823 825 Gene3D Ribonuclease Inhibitor 485 794 IPR032675 -
Car03g00823 825 Gene3D - 337 422 IPR042197 -
Car03g00823 825 Gene3D - 139 335 IPR027417 -
Car03g00823 825 SUPERFAMILY L domain-like 492 712 - -
Car03g00823 825 Coils Coil 33 67 - -
Car03g00823 825 SMART AAA_5 172 343 IPR003593 -
Car03g00823 825 Pfam NB-ARC domain 308 419 IPR002182 GO:0043531
Car03g00823 825 Pfam NB-ARC domain 158 278 IPR002182 GO:0043531
Car03g00823 825 PANTHER - 1 806 - -
Car03g00823 825 PANTHER RPP4C4 1 806 - -
Car03g00823 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 431 IPR027417 -
Car03g00823 825 PRINTS Disease resistance protein signature 175 190 - -
Car03g00823 825 PRINTS Disease resistance protein signature 249 263 - -
Car03g00823 825 PRINTS Disease resistance protein signature 369 383 - -
Car03g00823 825 PRINTS Disease resistance protein signature 642 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00823 Car-Chr3 44265664 44268141 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00823 156 507 WRKY Transcription Factor Family AT5G45050 24.665 1.97e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00823 - - cam:101507264 1514.59