Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00817 ATGTCACACAAGAAGAAGATGGTATCCCAAAACCTCACAATCATTATCATTTTCCTCTCTAACTTTTCATCTCTTGCACATATCGAGCCAGCCGGGCATAATTCccaaataacccaaaccaaaaacgaaacccaaacccaaacccgaaccaaaacAGTAGCGTACATAGAATCCTCGTGCCAAGAAACAAGGTACCCAGATCTATGCATCCGTTCATTATCTACATTCGCCAAATATTCAACCATAGATGGGCCTGACCACTTGGCCCACATAGCCCTTTCAGTTAGCCTAACCAAAGCCCTTCAAACAAGAGGTTACTTATTAAAAGTGGTTAAACAACTTGAAGACGAAATCAACAATCCTAGTGGTCATGTGTACTTAACTATACAAGATTGTGTGCAACAAATCAATGATAGTGTTGACCAACTTAGCCAAGCGATTAAAGAGCTTCGAAGGGTGAACAATTTAGGTAAAAATATAAATGATAAAATCTTGTGGCATATAAGCAACGTTGAGACATGGGTGAGTACTGCTTTAACAGATGCTAGCTATTGTGTTCAATCGTTTCCTGGGTATAGGATGAGTAAGAGGACTGCTACTATAAAAGTTAAGGCACAAAATGTTGCTGAGGTTACTAGTAATGGACTTGCCTTGTTTCATAGATATGCTGTTAAGTACAGAGAAGCTGCTAGATCTGCCAAGAAACCATAA 711 0.3643 MSHKKKMVSQNLTIIIIFLSNFSSLAHIEPAGHNSQITQTKNETQTQTRTKTVAYIESSCQETRYPDLCIRSLSTFAKYSTIDGPDHLAHIALSVSLTKALQTRGYLLKVVKQLEDEINNPSGHVYLTIQDCVQQINDSVDQLSQAIKELRRVNNLGKNINDKILWHISNVETWVSTALTDASYCVQSFPGYRMSKRTATIKVKAQNVAEVTSNGLALFHRYAVKYREAARSAKKP 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00817 236 PANTHER BNAANNG18590D PROTEIN 16 226 - -
Car03g00817 236 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 221 IPR035513 -
Car03g00817 236 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 222 IPR035513 -
Car03g00817 236 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 221 IPR006501 GO:0004857
Car03g00817 236 CDD PMEI-like_3 58 223 - -
Car03g00817 236 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 226 - -
Car03g00817 236 SMART PMEI_2 51 218 IPR006501 GO:0004857
Car03g00817 236 Coils Coil 133 153 - -
Car03g00817 236 Pfam Plant invertase/pectin methylesterase inhibitor 55 218 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00817 Car-Chr3 44034167 44035003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00817 4 219 Carbohydrate Esterase AT3G49220 26.027 1.95e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00817 - - cam:101507576 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00817 03 44034167 44035003 Car03g00817 03 44034167 44035003 ECH