Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00805 ATGTCTTCTTCTCTTTTATTCCTACTTCTAAAACTACAAATCTTCTTCATATGTTGGTCTGAATCCTTTTCCATTAACACTGAACTTGAAACTCTGATGACTATAAAAGAGTCTTTGGACCCAGAAAACCGTGTCTTAATCTCATGGAACAATCATTCTGACCCATGTAGTGGAGTTTTTGAGGGTATAGGTTGTAATGAGAAAGGTTTTGTTAGTAATATATCACTTCAAGGAAAGGGACTATATGGTAAAATACCTTCAGTGATTGGTAGTCTTAAGAGTTTGACAGCTGTTTACCTGCACTTCAATGCTTTGAATGGGATTTTGCCTAAGGAGATTGCAAGTTTGACTCAGCTTAGTGATTTGTATCTTAGTTTTAATAATCTCTCTGGTAATATCCCTCATGATATTGGTAACATGTCAAATCTTCAAGTTTTGCAGCTTTGTTACAATGAGCTTAACGGAAGTATACCTAGCGAACTGGGAAGATTAAAGAGGCTAACCATTGTTGCCCTCCAAAATAATCACTTAAGTGGCGCAATTCCTGCAAGTTTGGGTGAGCTAGAGACACTAGAAAGATTGGATCTCAGTTTCAATACCCTTTTTGGTCCAATTCCAGTGACATTGGCCAATGCACCTAAACTACAGACTTTGGATATAACAAACAATTCACTCTCTGGCAGTGTCCCTACAGCACTGCAAAGACTGAAAGGAGGGTTCAAGTATATTAACAATCATGGTTTATGTGGCACTGGATTTTCGGATTTAGATTCTTGCCGAATAGTAAGCAATTCAGATCCAGTTAGACCTGAACCATATGAACCAATAAATAATATTACTTCAAGAGATTTTCCGGCTGAAAGCTGCGGCGATGCTGATTGTATAAAGCGGTCAGAAACTTCAACAATTGGATTGGCTTTTGTGATGATTGGTGTTGTTAGTGTTTTTTCTGTTACTGGAGTTTTTCTGTTCTTATGGTATCATCATAAGAAACAAAAAATTGGAAGCACTGATGAAAGTAGTGACAAGATCAAGAAAGTATATCGGAAAAACTATGCATCTCCGCTTATAAGTTTGGAGTATTCGAGTGGATGGGATCCGTTATCGAAAGGTGTTAACGAGGATTTTCTGCAGAGCTTTATGTTCAATCTAGAAGAAGTAGAGCGCGCAACGCAGTGCTTCTCGGAGATGAATTTATTGACGAAGAATAATATTTCGGCTAACTATAGGGGTATCTTGAGAGATGGATCTGTTGTGGTTATAAAGTGCATTGCAAAGACAAGCTGCAAGTCTGATGAAACTGAATTCCTGAAAGGTTTGAAGACGTTAACTTCGTTGAAGCACGAAAATGTAGTTCGGTTGAGAGGATTTTGCTGTTCGAAAGGCCGGGGGGAATGTTTTCTGATTTATGATTTTGTCTCGAATGGAAGTTTGTCAAAGTATCTTGATGTTAAGAGAGGAAGTGATCATGAGGTACTTGAATGGTCCACGAGAGTATCCATCATCCGCGGTATCGCCAAAGGTATTGGTTATCTGCATGGAAAGAAAGGAAGCAAACACTCTCTTGTACATCAAAATATATCATCTGAAAAAGTTCTTGTCGATTTTCGGTACAATTCGTTACTTGCAGATTCAGGATTGCACAAACTACTTGCTGATGATGTCATTTTCTCCACCCTCAAAGCTAGTGCTGCAAAGGGTTACCTGGCTCCTGAATACACAACAACAGGTCGTTTCACGGAAGAGAGTGATGTGTATGCGTTCGGGGTGATCGTTTTCCAGCTTCTCGCTGGAAAGCATGATATCACTCAGTTAAGTCGCCAATGGATAGAAACTGCTAGTTTGAAATATGTTATTGATGAGAATCTTGAAGGGAAGTTCGGAGAATCGGAGGCAGAAAAATTGGCGAGAATCGCCTGCCTTTGCACTCATGAATCTCCCCATGACCGACCGACTATGGACAATGTAATGTTAGAACTGAGTGATAAGTGGTAA 1995 0.394 MSSSLLFLLLKLQIFFICWSESFSINTELETLMTIKESLDPENRVLISWNNHSDPCSGVFEGIGCNEKGFVSNISLQGKGLYGKIPSVIGSLKSLTAVYLHFNALNGILPKEIASLTQLSDLYLSFNNLSGNIPHDIGNMSNLQVLQLCYNELNGSIPSELGRLKRLTIVALQNNHLSGAIPASLGELETLERLDLSFNTLFGPIPVTLANAPKLQTLDITNNSLSGSVPTALQRLKGGFKYINNHGLCGTGFSDLDSCRIVSNSDPVRPEPYEPINNITSRDFPAESCGDADCIKRSETSTIGLAFVMIGVVSVFSVTGVFLFLWYHHKKQKIGSTDESSDKIKKVYRKNYASPLISLEYSSGWDPLSKGVNEDFLQSFMFNLEEVERATQCFSEMNLLTKNNISANYRGILRDGSVVVIKCIAKTSCKSDETEFLKGLKTLTSLKHENVVRLRGFCCSKGRGECFLIYDFVSNGSLSKYLDVKRGSDHEVLEWSTRVSIIRGIAKGIGYLHGKKGSKHSLVHQNISSEKVLVDFRYNSLLADSGLHKLLADDVIFSTLKASAAKGYLAPEYTTTGRFTEESDVYAFGVIVFQLLAGKHDITQLSRQWIETASLKYVIDENLEGKFGESEAEKLARIACLCTHESPHDRPTMDNVMLELSDKW 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00805 664 Gene3D Phosphorylase Kinase; domain 1 369 472 - -
Car03g00805 664 Gene3D Ribonuclease Inhibitor 143 259 IPR032675 -
Car03g00805 664 Pfam Protein tyrosine and serine/threonine kinase 417 659 IPR001245 GO:0004672|GO:0006468
Car03g00805 664 SUPERFAMILY L domain-like 26 237 - -
Car03g00805 664 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Car03g00805 664 Gene3D Transferase(Phosphotransferase) domain 1 474 663 - -
Car03g00805 664 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 662 - -
Car03g00805 664 ProSiteProfiles Protein kinase domain profile. 394 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00805 664 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Car03g00805 664 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Car03g00805 664 SUPERFAMILY Protein kinase-like (PK-like) 377 660 IPR011009 -
Car03g00805 664 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00805 Car-Chr3 43163463 43167132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00805 9 508 Miscellaneous Gene Families AT4G22730 47.893 7.18e-164 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Car03g00805 PK_Tyr_Ser-Thr 5.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00805 - - var:108327466 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00805 03 43163463 43167132 Car03g00805 03 43163463 43167132 ECH