Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00793 ATGCCTCCAAGAAAGAAGCCTAACATTTCATCTTCATCTACCTCCTCTTCTAAGAAGCCCAATCCACAACCTTCCAAATACGGCATCCAACACTTCTTCGATCGCCAAACAATCCATAACTCTCAGAAGCAGCAAACTAACAATGCAACTTCTCAGGTTTCTTCTGTTCCTCTCTCACCGCTCGAAAAGCCCAACAGCAGCGAGGCTCCGTCTTTGCAGAATACTATCCCAGATAATTCCCTCTCTGAAGTGTCACCGGAGATGTCCAAGTCCATGTCCCTTAAGCGATTCAAATTCTCACCTGGGATGTTTATCAAGCAGAGCCAGGATGATGGGGTTAATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGGCTGCAAGCAGTTTCAAAACACATGCCTAAGTTAATTAAAGCATTGGCTGATTCTTCGAGGACCAACATGTCGTCAATTTGCAGCAGCTCAGAAGAAAAGGCAATTGTGGACTTCAATGGCAATCCAACTACTTTGAGCAATTCTGGCATGGCTGGTGGAAGAAATCCATTCAGAACTCCACCATCTTTGTCTTGTCGCCTAGATAAGGTGATCAATCCACTAGATGTTGATCACAATAAACCATCTGAGCAGCCTTTTTTGAGGCAGCACAAAAAGGCATTGCTTGAACTTTTAGATCAAGTTGAAGATGCAATCGGTGTTGATAGTGATACAATATGTGATAAAGCCACTCATTCCTTTAAATCACAAGTTGGAATCGCTAACGATCTCCCTGTCAGAGTCAACCATACAGTTGAAAGGACTAAATCACATATACCTAAAGACATTGGTGTTTTCTCCAATTATAATTATTTGGTTTTGGAGGTATCTGAAAAATTGCAACCTGCTGATTCTTCTGCTGCTAAATGCCCGTACAAGGTGCTTCGTTTACTAAATGAACAAACTGGAGAAGAGCGAGCTGTAAACTTGTGGGATGAATGGTCTTACAGTGTAATTTCACCTGGAGATACTGTGAACGTAATTGGTCAATTTGATGAAGGGGGAAATTGTGATATTGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTTGTGTCTGGAACACGGGTAGTTGCTGGCAGTTTTAGTTGCCCAAGGAGAGCTGTCTTAGATGAGAGGCTAAAATCCAATGAGTACTCAATTGCAGCTTTATGTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTTACAAGTAACAATCCCACAATAAACTTCTTGGAATGTTACACAGAAGTAGTTTTGCAGAAAAATATTGAAAGTTTATTTGCATGTGGAGTAAATGAAAAGGATGTTCACAAAACCTTGATTGATGGTATCCCTAAAATATACAATTGGATCATGCTGTTCAGAAATATGGAGGAAAGAGAAGACCCTAATGTTGACTTTGGATGTGTTAATGGAATGAAGAAAGTTGGCATATCTGAGGCAAGCTCCAATTTGCTTTCTTGTGTAATAGATATTGAAGAAATGGCATGGGCACCAAAATATGGTTTGAAAGGGATTGTTGATGCTTCGGTTAGAGTGATGGTCCAATCAAGAAAAGATAAACCAGAGGAAAAGATCATGCCAGTAGAGTTCAAAACGGGAAAATCAACTAATAGCCAGGCAAGATTCTGGATTATTCTGAAAGATTTATTCTGTCTTGTTTCGATTAACAGGTACCAGAAGACCATTGATTCTGGCCTTCTATATTATCTCCAAACAGATCATACACAGGGCATTATGGTTCAAAGATCTGACTTAGTTGGGTTAATAATACGGCGTAATGAGCTAGCAAGTGATATTTTGAAGGCATTACTCTTGCAACAACTTCCACCAGTGTTACAGAGTCCTAGCATGTGCAGAGGTTGTCGCCATCTTAATGTCTGTAGCATTTTTCATAAGGCACATAGTGGAGGAGTAGAGAGCAAAGGATTGGGAGATGTTTTTGATTCCCATACTAGTCACTTGACATCATCTCATTCTAAGTTCCTCTGCCATTGGGATCATTTGATTGATTTAGAAGCTAAAGGGATTGAGTATTTGAAGAAAGAGGTGTGGCGATCATATAATTTGAGGACTCGAAACGCTGGTGGTCTTTCTTCTATTGTTATTGATGCTTCACAAGGAATACCTTATTCGAAATCTCACGAAGATAATCGTTTCGTTTATCGTTTTGTTCCACAAGATAGTTCTTGCCCCGCTATAATTTCTGATGGCGATCCTTCTAGTGCTTCTTTGAAAACTGATTTAGATCTCACACTGAGAAGTGGCGACCACGTGATATTGAGTAATGAATCAAGTCATCAAACTATTGCAAGAGGGGTGATTTCAGATATTAGCCAGAATCATATATCTGTTTCCTTTTCCAAGCTCTTAAGAATTCCTGGGATGTCTTCCACGGCACATGATCTCCTTCAGCAGGTTTGGAGAATCGACAAGGATGAAGCTGTGACTTCGTTTGCAATTATGAGGTTTAATCTAGTACAACTTTTTCTACAAAATGATCAAAGTGCTCATCTCCGGAGAATGATTGTAGACCTTGAGGCTCCTAGATTTGACAGTGGTTCTATAGTTAGCCAGGATCCAGCAATATCATACGTTTGGTCTGAGAAGAGTTTGAATGATGATCAACGTAGAGCAATTCTCAAGATACTCACGGCAAAAGATTATGCGCTTATATTAGGGATGCCAGGAACGGGGAAGACATCCACGATGGTCCATGCTGTGAAAGCCTTGTTGATTAGAGGCACATCCATTTTGCTTACAGCCTATACGAATTCTGCAGTTGATAATTTACTAATCAAATTAAAAGCACAGGGAATTGATTTTGTACGTGTTGGAAGACATGAAGCAGTGAATGAAGAGGTCAGAGGGCACTGCCTATCAGAAACAAACGTACAGAGTGTTGAAGATATCAAAATAAGGTTAGAACAAGCCAAAGTTGTTGCAGTTACTTGTTTGGGCATTTCTAGTCCCTTGCTTGCCAACAAGAGATTTGATGTATGCATTATGGATGAAGCCGGGCAGACAACTCTGCCGGTGTCTTTGGGCCCTCTAAGATTTGCTTCAACGTTTGTTCTTGTTGGGGATCATTATCAACTGCCACCACTTGTCCAAAGCACAGAGGCCCGAGAGAATGGCATGGGGATGAGTTTGTTTTGTAGGCTTTCAGAAGCTCATCCACAGGCAATTTCAGCTTTGCAGAGTCAGTACCGTATGTGTCAGGGTATTATGGAGTTGTCAAATGCCTTGATATATGGTGACAGATTGAGGTGTGGTTCAATTGAGATAGCTAATGCCAAACTTGAGTTTTCTGGTTTAAACTGCTGTTTTCCTTGGCTAGAAGATGTTTTGAATCCTGGAAGGCCAGTGATATTTATTGATACTGATATGTTGCCTGCCTTAGAGGAAAGAGATCAGAAAATTGTAAATAACCCTATTGAAGCTCACATAATAGCTGAGGTTGCAAAGGAATTGGTAAAAAATGGAATTGGAGGAGAGCACATTGGCATTATTACTCCATATAATTCACAGGCAAACCTCATCCGGAGTGCTGTTTGCATAACATCCTTGGAAATACATACCATTGACAAATACCAGGGTAGAGATAAGGACTGTATATTAGTATCTTTTGTACGGTCATGTGAGAATCCAACAAGCTGTGTGGCTTCTCTACTTGGTGACTGGCACAGAATAAATGTGGCTCTTACTCGTGCTAAGAGAAAGTTGATCATGGTGGGATCTCGTAAAACTTTGTTGAAGGTTCCACTACTTAAGCTTCTCATTAAGAAAGTTGAGGAGCAATCTGGAATTTTAAGTGTGTCTAAGAAGGATATCTATCAAAAAGGGGAGCTCATTCGATGTTCCCAAATGAGATGA 3906 0.4032 MPPRKKPNISSSSTSSSKKPNPQPSKYGIQHFFDRQTIHNSQKQQTNNATSQVSSVPLSPLEKPNSSEAPSLQNTIPDNSLSEVSPEMSKSMSLKRFKFSPGMFIKQSQDDGVNEVTWKISPVNERLQAVSKHMPKLIKALADSSRTNMSSICSSSEEKAIVDFNGNPTTLSNSGMAGGRNPFRTPPSLSCRLDKVINPLDVDHNKPSEQPFLRQHKKALLELLDQVEDAIGVDSDTICDKATHSFKSQVGIANDLPVRVNHTVERTKSHIPKDIGVFSNYNYLVLEVSEKLQPADSSAAKCPYKVLRLLNEQTGEERAVNLWDEWSYSVISPGDTVNVIGQFDEGGNCDIDHDNNFLIVHPDILVSGTRVVAGSFSCPRRAVLDERLKSNEYSIAALCGTLLHQIFQAGLTSNNPTINFLECYTEVVLQKNIESLFACGVNEKDVHKTLIDGIPKIYNWIMLFRNMEEREDPNVDFGCVNGMKKVGISEASSNLLSCVIDIEEMAWAPKYGLKGIVDASVRVMVQSRKDKPEEKIMPVEFKTGKSTNSQARFWIILKDLFCLVSINRYQKTIDSGLLYYLQTDHTQGIMVQRSDLVGLIIRRNELASDILKALLLQQLPPVLQSPSMCRGCRHLNVCSIFHKAHSGGVESKGLGDVFDSHTSHLTSSHSKFLCHWDHLIDLEAKGIEYLKKEVWRSYNLRTRNAGGLSSIVIDASQGIPYSKSHEDNRFVYRFVPQDSSCPAIISDGDPSSASLKTDLDLTLRSGDHVILSNESSHQTIARGVISDISQNHISVSFSKLLRIPGMSSTAHDLLQQVWRIDKDEAVTSFAIMRFNLVQLFLQNDQSAHLRRMIVDLEAPRFDSGSIVSQDPAISYVWSEKSLNDDQRRAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRVGRHEAVNEEVRGHCLSETNVQSVEDIKIRLEQAKVVAVTCLGISSPLLANKRFDVCIMDEAGQTTLPVSLGPLRFASTFVLVGDHYQLPPLVQSTEARENGMGMSLFCRLSEAHPQAISALQSQYRMCQGIMELSNALIYGDRLRCGSIEIANAKLEFSGLNCCFPWLEDVLNPGRPVIFIDTDMLPALEERDQKIVNNPIEAHIIAEVAKELVKNGIGGEHIGIITPYNSQANLIRSAVCITSLEIHTIDKYQGRDKDCILVSFVRSCENPTSCVASLLGDWHRINVALTRAKRKLIMVGSRKTLLKVPLLKLLIKKVEEQSGILSVSKKDIYQKGELIRCSQMR 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00793 1301 PANTHER DNA2/NAM7 HELICASE FAMILY 157 1276 IPR045055 -
Car03g00793 1301 CDD DEXXQc_DNA2 881 1081 - -
Car03g00793 1301 MobiDBLite consensus disorder prediction 1 87 - -
Car03g00793 1301 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2 157 1276 IPR026851 GO:0017108|GO:0017116|GO:0033567
Car03g00793 1301 Pfam AAA domain 983 1049 IPR041677 GO:0004386
Car03g00793 1301 Pfam AAA domain 882 973 IPR041677 GO:0004386
Car03g00793 1301 MobiDBLite consensus disorder prediction 34 87 - -
Car03g00793 1301 CDD SF1_C_Upf1 1082 1258 IPR041679 -
Car03g00793 1301 Pfam AAA domain 1058 1258 IPR041679 -
Car03g00793 1301 Gene3D - 1080 1288 IPR027417 -
Car03g00793 1301 Pfam DNA replication factor Dna2 312 523 IPR014808 -
Car03g00793 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 1267 IPR027417 -
Car03g00793 1301 Gene3D - 487 639 IPR011604 -
Car03g00793 1301 Gene3D - 809 980 IPR027417 -
Car03g00793 1301 Gene3D - 981 1079 IPR027417 -
Car03g00793 1301 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00793 Car-Chr3 42060204 42106968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00793 1 1023 Core DNA Replication Machinery Family AT1G08840 53.420 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00793 K10742 - gmx:100799415 1771.9