Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00792 ATGTTTCCTCTTCCTCCTCCATCTCCACTTCTTACAACCACCACCAACATTTCTTCCATCTCTCCCACTTCTCTATCCTTCTTCTACACCAACAATTTCAGAAGAATCCTCAACAACCATAGGGTTTTCGCAATGTCTAGTAGTAGTAACAACTCTTCTTCATTCAAGATGAATCTCAACGAGTACCTTGTTACTCTCGAAAAGCCCCTCGGTATCCGATTCGCTCTTACTTCCGATGGAAGAATCATCGTTCACTCTCTCACCAAAGGGGGTAATGCGGACAAGTCCAGGATAATTATGGTGGGTGACACTTTGAAGAAAGCTGGTGATTCCTCTCACAATACTCTCCTCCAGATTCATGACGTTGGTGATACACAGAAGGTGCTAAAGGAGCAAACAAATTCTTTTAGCTTGGTTCTTGAGAGGCCCACATCTACATTTCCCATTCAACTACTGCATAAGATGAATGATCTTGAAATATTGTATAATAGGGGTCGAGTTCCTATTGTCACTTGGAACAAGACTCTTTTGGCATCAAATTTACAACCATCTAGCGAGAGCTGTGGGAATTCTGGATTTTTGATGTTTAACTCAAAGTTTCTTAAATCAAATGGAAGCAAGTTATTGGGAATTCAAAATCAACATGCCATCACTCACGGTGAAAAAAATTTCGTTAGTGAACACACAACACAACTTGCTTGTGTTTTTACTGAAGAAGCGTGTGGAGATGGAGATTGGGCTCACGGAAGTTTTCCACTTGAGGAATATATTCAGGCTCTAGATCGTTCCAAGGATGAGATGTACTATAATCACTCTCTTGGTATGCGTTATAGTAAGATTACAGAGCAAATATATGTGGGGTCCTGTATACAAACAGTAGATGACGTGGAAACCTTGTCAAAAGTTGAGGGAGTTACTGCTGTGCTGAACTTCCAAAGTGGAACTGAAGCTGAAAATTGGGGAGTCAATGTAAAATCAATCAATGAATCTTGTCAAAGGAATAATATTCTCATGATCAACTATCCTATACGGGAAGGGGATTCTTATGACATGAGAAAAAAACTCCCATTTTGTGTTGGGCTTTTATTACGGTTGCTAAGAAAGAATCTTCGTGTTTTTGTTACTTGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTACATTGGATGACAGATATTTCCCTTCATGCAGCCTATACTTGGGTCACTGGGATGCACACGTGCAGGCCTGACAGGCCGGCAATTGCATGGGCAACATGGGATCTTATAGCTATGATTGAAAAGGGCAAACATGATGGTCCTCCCACTCATGCTGTCACATTTGTGTGGAATGGTCATGAGGGAGAGGATGTAAATTTGGTTGGAGACTTTACTGGAAATTGGAAAGAACCGCTTAAGGCAAAGCATCAGGGTGGATCAAGACATGAAGTAGAAGTTAAACTTCCACAAGCAAAGTATTACTACAAATTCATTGTTAATGGACAATGGAAGCATTCAACTGCTTCACCGGCTGAAAGGGATGATAGTGGAAATGTTAACAATATTATTGTGATTGGTGAAACTGCCAGCGTTCGGCCTTCTGTTCAGCAACAGCAAAAAGATGCCAACGTTGTAAAGAGAAGCCTGGCAAAGAGTAATTATGATTGCTTTATTGCCTTGCAGAAGATGTCCTTAGTAGAGGTTATCCAACTTAGTGGAAATGGTAAACTTGACTTGATCAAAGGTCCTCGCGGTACTATTGTCCCTTCACATACTCTATGTTGA 1776 0.4099 MFPLPPPSPLLTTTTNISSISPTSLSFFYTNNFRRILNNHRVFAMSSSSNNSSSFKMNLNEYLVTLEKPLGIRFALTSDGRIIVHSLTKGGNADKSRIIMVGDTLKKAGDSSHNTLLQIHDVGDTQKVLKEQTNSFSLVLERPTSTFPIQLLHKMNDLEILYNRGRVPIVTWNKTLLASNLQPSSESCGNSGFLMFNSKFLKSNGSKLLGIQNQHAITHGEKNFVSEHTTQLACVFTEEACGDGDWAHGSFPLEEYIQALDRSKDEMYYNHSLGMRYSKITEQIYVGSCIQTVDDVETLSKVEGVTAVLNFQSGTEAENWGVNVKSINESCQRNNILMINYPIREGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDISLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMIEKGKHDGPPTHAVTFVWNGHEGEDVNLVGDFTGNWKEPLKAKHQGGSRHEVEVKLPQAKYYYKFIVNGQWKHSTASPAERDDSGNVNNIIVIGETASVRPSVQQQQKDANVVKRSLAKSNYDCFIALQKMSLVEVIQLSGNGKLDLIKGPRGTIVPSHTLC 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00792 591 ProSiteProfiles PDZ domain profile. 63 144 IPR001478 GO:0005515
Car03g00792 591 SUPERFAMILY E set domains 440 523 IPR014756 -
Car03g00792 591 CDD E_set_AMPKbeta_like_N 443 522 - -
Car03g00792 591 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 37 545 IPR030066 GO:0005983
Car03g00792 591 CDD DSP_laforin-like 275 421 IPR045204 GO:0019203|GO:0046838
Car03g00792 591 ProSiteProfiles Dual specificity protein phosphatase domain profile. 276 432 IPR020422 GO:0006470|GO:0008138
Car03g00792 591 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 37 545 - -
Car03g00792 591 Gene3D Immunoglobulins 430 526 IPR013783 -
Car03g00792 591 Gene3D Protein tyrosine phosphatase superfamily 269 536 IPR029021 -
Car03g00792 591 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 266 409 IPR029021 -
Car03g00792 591 SUPERFAMILY PDZ domain-like 43 148 IPR036034 GO:0005515
Car03g00792 591 Pfam Glycogen recognition site of AMP-activated protein kinase 443 524 IPR032640 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00792 128 543 Protein tyrosine phosphatase (PTP) family AT3G01510 67.548 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00792 - - gmx:100814503 945.266