Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00791 ATGGGAGTTCACGGTCTCTGGGAACTACTCGCTCCCGTGGGTCGCCGGGTCTCCGTTGAAACCCTCTCCGGGAAAACTCTCGCCGTCGACGCGAGCATATGGATGGTGCAGTTTATTAAGGCAATGCGTGACGAGAAAGGTGAAATGGTTCGCAACGCTCATTTGCTTGGATTCTTCCGTCGCATTTGTAAGCTTTTGTTTCTACGGACGAAGCCTGTTTTCGTTTTTGACGGCGGAACCCCTACATTGAAGCGCCGCACTGTTATTGCTCGCCGTAGGCAGCGTGAAAATGCCCAAGCTAAAGTCCGTAAAACTGCTGAGAAATTGCTTCTCAATCACTTAAAGGCATTGAGGTTGAAGGAACTGGCTGATGATATTAAGAACCAGAAGCTGAAGCAAACGAGTGGCACAAAGTGTCAGGAAAGATCTAATCAAGTAGACTTTGTTGGTAGTGATTTAGGAAGAAGTAACACGATAGAGCTAGAAGAAATGTCTGCAGCTATATCTGTGCCTAAGGAGGTAAGAAATCTATCGCAGAATATAATATCGACAAGCTGCAACCAAGAGGAGCTTGATGAAATGCTGGCAGCGTCTATAGCTGCAGAGGAAAGTGGAATGCGATCCCGAGAAGTAGTGGCATCTACTGTAATGAATTCTTCAAATGCAGGCGAAGAGACGATACTGCCATCAGACAATGCGGAAGTTGATTTAGCTGTTTTAGCTGCTTTGCCACGCTCAATGCAACTTGATATTCTTGCGCAGCTTAAAGGGAAGAAAACAGAAGGACTAATGAAGCAAGTTGACCACCAGATAAGACATGAGGTCGGTGATTGTGGCAAAGGTAAAAGCATTATTTTCCATGAAACTGACATGGTTGGGTGTAGCTCAAGACGTGATGTCAATGTGACATCAAGGAGTGACAATCAAAACAAAATTGATGAAATGTTAGCCGCATGTATTGATATGGAGGAAAATGCCAAATTAGTAAATAATGCATCAAATTCAAGTTTTCTTGGGGATTCCACCATTAAGGAAAatgatgataactatgatgaagatgaagagatgatACTGCCAGCTATGTACAGTGAAGTTGATCCAGCTGTTCTGGCCTCTCTGCCTCCATCAATGCAACTGGACCTCCTTGTTCAGATGAGAGAGCGATTGATTGCAGAGAACAGGCAAAAGTATCAGAAAGTCAAGAAGGATCCTGCAAAGTTCTCTGAGCTACAAATACAAGCTTACCTTAAAACTGTTGCTTTCCGTCGTGAGATAAATGAAGTGCAGAAAGCTTCTGTTGGAGGAGGAGTAGGTGGTGTACAGACTTCACGAATTGCATCGGAAGCCAACCGAGAGTATATATTCTCCTCATCTTTTTCGGGTGACAAACAAGGACTTACCTCCACCAGATTAGAGAGAAATGTCGAAGATACACAGCAAATGGAACGCGGAAAACGTCCTTCCCAGAATTTTATAAATAACATAGCAGCAGGAAATGTCTCTAATACTTCAAATGGATTGGTTTGCAATGAACCTAGTGAGCCTGTTGATGAAAGTATTGAGACATATCTAGATGAGAGGGGTCGATTTCGAGTTAGTAGATCAAGAGCTATGGGGATGCGTATGACCCGCGATATCCAAAGAAATTTGGATTTGATGAAGGAGATTGAGCATGAAAGAACACATGCAAACAAGGTTGATAACATTCAAACTGTGCTAACTGCAGAAAATAGTCCATCAGAATGTTCTGGGAACCAGCTTGGTGATAAAGCACGGGAGGTGAGTTTCGACTTGGTTGGAGAGAAAGTGCAAAATGAAAAATTGATGCTTGGTAAGGATACTTCAATAGAGGTATCCTTTGAATATGATTGCAATAATGAATTTGTAAGTGGTGGGGACGATATATTTGCCAGTTTAGTAGGAGGAATATCTACGGTACACTCTCATGCTGATGATACTGTGGTGGAAGTGCAACCTTCTGGTTCTGATTCAGATTGTGATTGGGAAGAAGGAATTGTTCAGAGTCAGAATACCATTTTTCCTGGATATGATAAAGTGGAATTAAAGTCTTCTGGTGCAGGTGAGTATAATAATAATGAAAGTGAAGAAGAATGGGAAGAAGGGGATTGTAATGGTACTAAAAGCACCGTATTGTGTCCAGCTGAGTCGGGAAAGTTGGCATCAAAAGGGAGCTTGGAAGAGGAGTCTGATTTGCAGGAGGCAATTAGGAGAAGTCTTGAGAGTACACAGGATGGGAAATTTAAATGCATGTCATCTGTAGATGAGCACTCAAGTGCTTATGAGAATAAGTTGAATCCTAATTTAGAACATGGTGATAACGTGAATCATATTGGCTCAATGGATTTGAATGATAATGTGGAGGGTTCCGATTTGCCTAGGGAGGGTTGTACTGAACACAATAAGTTACTTGAAACTGTAGGAGACAAAAAGGAAATTCATGTGACTAGAAATAGCCTGGAAAATTTTGTGACATTTAATTCCAATGACACTGATATATTGATTGGCGAGCCTAGCAAACTGGATGGACACTTTAGATATGAAAATTCAATTTCAGATGCAAATGGCATGATGATGGTTGACATTCCTAATCCTATTGTTGCAGAGGAATTATTGGATAATGATGATGATGGTAAAGCGTCTTTGTGCTGTAACAATTCATCCAAGGTTGATCCACTTGGTGTGACTGAAGAGGGGAAAAAGGAATATATTAATGAATCTGAACCTTTGAGTAATTCTGACAATAGAAAGACTGCCATTCTTTTCATGGAGTCATCCTTGAAAGGAGCTAAAGAAGACCTAGACATGGAGTTAAAATTGCCTTCAGTTAACAATGATGGAAATTTACCTATGAAAAGGAATAGTAACCTCTCCCAAGACTCAATGAACGCCCCAGGAGATTTTCCTGTACAATTGGATGAGGTTCGATTGAATGAAGAAATGCAAATTCTTGGTCGGGAATATATGAACCTAGAAAATGAGCAGAGGAAGCTTGAGCGTAATGCAGAATCCGTCAACAGTGAATTATTCACTGAATGTCAGGAACTTCTGCAAATGTTTGGCTTGCCATATATTATTGCTCCTATGGAAGCTGAGGCACAGTGTGCTTACTTGGAACTCTCAAAACTGGTTGATGGTGTTGTGACTGATGACTCTGATGTCCTTTTATTTGGGGCGCGCAGTGTTTACAAGAATATATTTGATGATCGCAAATATGTGGAGACATACTTCATGGAGGACATCGAAAAGGAGCTTGGATTGACCAGAGAAAAATTAATTCGCATGGCACTACTTCTTGGGAGTGACTATACTGAAGGTGTAAGTGGGATTGGCATTGTTAATGCTATTGAGGTTTTAAATGCATTCCCTGAGGAAGATGGCTTCCTGAAATTCCGGAAGTGGGTTGAGTCACCAGATCCCACCATCCTTGGAAGGTTGGATGCAAAATCAGTATCAAATACCCAAAAGAAAGGGTCAAAAGCTGCATCAGACCAGAACATCTCCCATGACCAGGAAAAAAAGGAGTCACCTGATTACATCCACCAAACAAGGCAAATTTTCATGGACAACCATAGAAATGTTAGCAAGAATTGGCATATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCTTACGTATCTCCACATGTTGACAAGTCGACTGAGCCTTTTACATGGGGAAAGCCAGATCAGCTTGTTCTTCGCAAATTGTGCTGGGAGAAATTTGGGTGGACTAGCCAGAAAGCCGATGAATTGCTGTTACCTGTTTTAACGCAATACAACAAACATGAGACTCAACTGCGGTTGGAGGCATTTTACAGTTTCAATGAAAGATTTGCAAAAATTCGTAGCAAGAGAATCAAGAAAGCAGTAAAAGGAATTACTGGTAAGCCACCTTCAGATTTAATAGCTGATTCTGTGGAGAACATGTCCAAGAGTATGAAAAATGGGAGAGGAAGTCCTGTTCAAGCTGTGAATGACAAATTGGAGACTTTGAAGGGAACAGAGGAAAGTCTTGCAGGTAGGAAGAAATCAAAATCTAAAGAGTCAGCGAAAAGGAATAATGATGGGGATACTGTTGCTAAGCCAAATACAAAGAAAAAGAAAATCAATGATTGTTCTGCTTCTGAGGTTGAGCATTTACAACCATATATGAAAACAGAAGGAGCACAACATGATGGGAAGGAATTGGTTTGGAATAAACGTGGCAGTGGGCAAGGAAAAGGTATAGGTGTTAGAGTAAAAATAGGCAGGGAGAAGAGAAGTCGTCGTTTTCAATCATCTGAAACTGAAACATCATCTAGTAGTAGTGATATTGACAATCATGAGCCAAGCGCACAAGTTGATGTGTCAACAGTTCCAGAAGTTGTGCGAAGGTCAATGCGGTCTCGGAAACCTGTCAACTATTCTTTCAAGGACCTTGAAATTGAAGATGATGTTGATTCATTTGATGAGAGCAATCAGACTTGCTTGCATGGAAAGCTATTAGAAGGAAAATCATCTTGCAGTGATGATGCCGATGGAGATGGTTTCAGTAGAGGGAAAGAAAGCGGTATGACAGAAATTCCTCTGAAGGATAGCTCATCCGGAGACTATCTAGAGCCAGAAACAGACGCTGGTGCAACATCACCAAGGACTCACCCTTCAAATGACTATCTTGAAATGGGAGGTGGGTTCTGTGTAGACGATAGTGAGATGGATAACAACCCTGAAGCAATCGACGGAGACTTGAACACAGCTACCCCAAACTGTCCACCCTGTTCTGAAGTTTTGGGTGAAACTGATCATGATAAAAGTAGTTCAGATATATTATTTTCAGGTGCTGAAAAGGTTACAAGTAAGATACACGATGGAGGGAAAAATGAGCAACTTCTAAATGCTGACATGGGGGTCTCGATACCAGAGAATGCTCATCATAATAGTGAGAGCTCGAAGGTAGCTTTTAGTGCTATGCCGTTTTTGAGGAGAAAAAGGAAGAAATGA 5004 0.4109 MGVHGLWELLAPVGRRVSVETLSGKTLAVDASIWMVQFIKAMRDEKGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPTLKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALRLKELADDIKNQKLKQTSGTKCQERSNQVDFVGSDLGRSNTIELEEMSAAISVPKEVRNLSQNIISTSCNQEELDEMLAASIAAEESGMRSREVVASTVMNSSNAGEETILPSDNAEVDLAVLAALPRSMQLDILAQLKGKKTEGLMKQVDHQIRHEVGDCGKGKSIIFHETDMVGCSSRRDVNVTSRSDNQNKIDEMLAACIDMEENAKLVNNASNSSFLGDSTIKENDDNYDEDEEMILPAMYSEVDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRREINEVQKASVGGGVGGVQTSRIASEANREYIFSSSFSGDKQGLTSTRLERNVEDTQQMERGKRPSQNFINNIAAGNVSNTSNGLVCNEPSEPVDESIETYLDERGRFRVSRSRAMGMRMTRDIQRNLDLMKEIEHERTHANKVDNIQTVLTAENSPSECSGNQLGDKAREVSFDLVGEKVQNEKLMLGKDTSIEVSFEYDCNNEFVSGGDDIFASLVGGISTVHSHADDTVVEVQPSGSDSDCDWEEGIVQSQNTIFPGYDKVELKSSGAGEYNNNESEEEWEEGDCNGTKSTVLCPAESGKLASKGSLEEESDLQEAIRRSLESTQDGKFKCMSSVDEHSSAYENKLNPNLEHGDNVNHIGSMDLNDNVEGSDLPREGCTEHNKLLETVGDKKEIHVTRNSLENFVTFNSNDTDILIGEPSKLDGHFRYENSISDANGMMMVDIPNPIVAEELLDNDDDGKASLCCNNSSKVDPLGVTEEGKKEYINESEPLSNSDNRKTAILFMESSLKGAKEDLDMELKLPSVNNDGNLPMKRNSNLSQDSMNAPGDFPVQLDEVRLNEEMQILGREYMNLENEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELSKLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVLNAFPEEDGFLKFRKWVESPDPTILGRLDAKSVSNTQKKGSKAASDQNISHDQEKKESPDYIHQTRQIFMDNHRNVSKNWHIPSSFPSETVISAYVSPHVDKSTEPFTWGKPDQLVLRKLCWEKFGWTSQKADELLLPVLTQYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKPPSDLIADSVENMSKSMKNGRGSPVQAVNDKLETLKGTEESLAGRKKSKSKESAKRNNDGDTVAKPNTKKKKINDCSASEVEHLQPYMKTEGAQHDGKELVWNKRGSGQGKGIGVRVKIGREKRSRRFQSSETETSSSSSDIDNHEPSAQVDVSTVPEVVRRSMRSRKPVNYSFKDLEIEDDVDSFDESNQTCLHGKLLEGKSSCSDDADGDGFSRGKESGMTEIPLKDSSSGDYLEPETDAGATSPRTHPSNDYLEMGGGFCVDDSEMDNNPEAIDGDLNTATPNCPPCSEVLGETDHDKSSSDILFSGAEKVTSKIHDGGKNEQLLNADMGVSIPENAHHNSESSKVAFSAMPFLRRKRKK 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00791 1667 MobiDBLite consensus disorder prediction 1153 1171 - -
Car03g00791 1667 SMART HhH_4 1095 1128 IPR008918 GO:0003677|GO:0003824
Car03g00791 1667 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Car03g00791 1667 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Car03g00791 1667 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Car03g00791 1667 PRINTS Xeroderma pigmentosum group G protein signature 644 662 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Car03g00791 1667 Coils Coil 980 1014 - -
Car03g00791 1667 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1093 1288 IPR036279 -
Car03g00791 1667 Pfam Ubiquitin binding region 364 389 IPR025527 -
Car03g00791 1667 Pfam Ubiquitin binding region 231 254 IPR025527 -
Car03g00791 1667 SMART xpgineu 1024 1093 IPR006086 GO:0004518
Car03g00791 1667 Gene3D - 940 1092 - -
Car03g00791 1667 MobiDBLite consensus disorder prediction 1505 1521 - -
Car03g00791 1667 Pfam XPG I-region 1027 1108 IPR006086 GO:0004518
Car03g00791 1667 MobiDBLite consensus disorder prediction 1342 1382 - -
Car03g00791 1667 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Car03g00791 1667 MobiDBLite consensus disorder prediction 1342 1461 - -
Car03g00791 1667 ProSitePatterns XPG protein signature 2. 1027 1041 IPR019974 GO:0016788
Car03g00791 1667 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 255 1667 - -
Car03g00791 1667 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 1 259 - -
Car03g00791 1667 MobiDBLite consensus disorder prediction 1420 1434 - -
Car03g00791 1667 MobiDBLite consensus disorder prediction 1435 1455 - -
Car03g00791 1667 Pfam XPG N-terminal domain 1 97 IPR006085 GO:0004518
Car03g00791 1667 Gene3D - 1093 1194 - -
Car03g00791 1667 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 255 1667 - -
Car03g00791 1667 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 259 - -
Car03g00791 1667 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Car03g00791 1667 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Car03g00791 1667 Gene3D - 1 151 - -
Car03g00791 1667 MobiDBLite consensus disorder prediction 1152 1185 - -
Car03g00791 1667 CDD H3TH_XPG 1096 1226 - -
Car03g00791 1667 SUPERFAMILY PIN domain-like 2 1108 IPR029060 -
Car03g00791 1667 CDD PIN_XPG_RAD2 1010 1094 - -
Car03g00791 1667 CDD PIN_XPG_RAD2 2 92 - -
Car03g00791 1667 SMART xpgn3 1 98 IPR006085 GO:0004518
Car03g00791 1667 MobiDBLite consensus disorder prediction 1504 1588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00791 Car-Chr3 41874327 41891742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00791 1018 1145 Core DNA Replication Machinery Family AT5G26680 33.108 2.33e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00791 K10846 - gmx:100820295 2011.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00791 03 41874327 41891742 Car03g00791 03 41874327 41891742 ECH