Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00777 ATGGTGGAAAGTGAAGAACAAAAGCGCAGTCCCATAATCCAAAAGAAGTTGATGGAATCAAATAGCCAAAACATGGCTACACTTATAAGTCCTAGATTCAAATCTGCTGCTGCTATGGCTGGTTGGGATGAAGAAGCACTTTTACTTGCAACACTCATTGTTGAAGACACACCTGTTAGGGATTCTAAACACAAGAAACGTTTTGTTTTGAATTCCAAATCCCCACATAACAATTCGTCAAGGAAACGTAGAGTTCTGAGGAATCCACGTCCAATTGTTCTTGATCTTGATGAAGAAGAAACTCCAAAAAAGGATAATGGGAAAAAGAAGAAAGAAAAGAAAAATTGTGTTAGTGAAGGAATTAATAAAGTGGAAGAAAATGAAAATAAATTGACTGAAAAGAATTCTACTACTGCTTCTGCTCTTCCATGTATTGATAAACTAAGGGAAGAGCTTTCATGTGCAATTTGTTTGGAGATATGCTTTGAGCCAAGTACCACTCCTTGTGGTCACAGCTTTTGTAGAAAATGTCTGAGATCTGCTGCAGACAAGTGTGGCAAAAAGTGTCCCAAATGCAGGCAATTGATAAGCAATGGACGATCGTGCACGGTGAACACGGTTCTGTGGAACACAATTCAACTTCTTTTTCCACAAGAAATTGAAGCAAGGAAAGTAATGTCTACTACTAATAATAGACAAGCAGCATCTCAGATTGTAATTCCAGAAACAACATTTTATACAAATACAAGGAATAGAAGTATACAGCCAATATATCCATCAAGTAGGCGAAACGATATCGATGAGGATGCTGCATTGGCTAGAATATTACAAAGACAAATTGATACAACAACAACAAGGGTTCATAGGAATCAAACCtcatcatcatcatcatcatcaAATAATGTTGGAAGAGTAAGGACAAGAAGAGGGGTTTCTACTAACCAAGATGAAGATGCTGCATTTGCTTTAAGATTGCAGAGAGAAGAGTTTCTGCAAGCTTTTAAGAGTAACAGCAGTAGCAACCATGAGGAACAGCCATCTTCCTCCTCATCCACCACATCTTTAGGTAGAGCAAATTTGAGAGCTATGGCAACTAGAGCCATGAATCTTCGTAATAGTAGAAATCGAAGGATGTAA 1137 0.3729 MVESEEQKRSPIIQKKLMESNSQNMATLISPRFKSAAAMAGWDEEALLLATLIVEDTPVRDSKHKKRFVLNSKSPHNNSSRKRRVLRNPRPIVLDLDEEETPKKDNGKKKKEKKNCVSEGINKVEENENKLTEKNSTTASALPCIDKLREELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEIEARKVMSTTNNRQAASQIVIPETTFYTNTRNRSIQPIYPSSRRNDIDEDAALARILQRQIDTTTTRVHRNQTSSSSSSSNNVGRVRTRRGVSTNQDEDAAFALRLQREEFLQAFKSNSSSNHEEQPSSSSSTTSLGRANLRAMATRAMNLRNSRNRRM 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00777 378 MobiDBLite consensus disorder prediction 336 356 - -
Car03g00777 378 MobiDBLite consensus disorder prediction 281 309 - -
Car03g00777 378 MobiDBLite consensus disorder prediction 63 115 - -
Car03g00777 378 SUPERFAMILY RING/U-box 146 217 - -
Car03g00777 378 ProSitePatterns Zinc finger RING-type signature. 169 178 IPR017907 -
Car03g00777 378 ProSiteProfiles Zinc finger RING-type profile. 154 193 IPR001841 -
Car03g00777 378 MobiDBLite consensus disorder prediction 66 87 - -
Car03g00777 378 PANTHER - 18 234 - -
Car03g00777 378 PANTHER - 284 372 - -
Car03g00777 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 223 IPR013083 -
Car03g00777 378 MobiDBLite consensus disorder prediction 88 115 - -
Car03g00777 378 PANTHER UNCHARACTERIZED 18 234 - -
Car03g00777 378 PANTHER UNCHARACTERIZED 284 372 - -
Car03g00777 378 Pfam Zinc finger, C3HC4 type (RING finger) 154 192 IPR018957 GO:0046872
Car03g00777 378 SMART ring_2 154 192 IPR001841 -
Car03g00777 378 MobiDBLite consensus disorder prediction 281 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00777 Car-Chr3 41073964 41076081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00777 154 208 RAD5 or RAD16-like Gene Family AT5G43530 37.288 6.53e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00777 - - gmx:102666585 409.838