Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00775 ATGACAATTTTGGACATTGACCTTAACGGATTACCAGTTGCTGATGAGGATGACGGACCTTCGATTCCGTTATTAGAAGTTGAACAGCCTGTCATTATTATTGATGACGATGATGTTATTGAATCTTCTCCGAGAGCTTTTGCTGAAGCAGCTAAAAACAAGTCAAGAAATCGCAACAGAAGCAGTAGACAACCTCTAAATGAAACAATTATTAATTACAATTTTTATATAAATTTGGAAGGCGGCGACGAAAGTAGCATAGCTATGGATATGATTGAACCACCACCAAAGGAACCTGTATTCAATTGTCCAATATGCATGGGACCTTTGGGAGAAGAAATTATGTCAACAAGGTGTGGTCATATTTTTTGCAAGAATTGTATTAAGACTGCTATAAATGTTCAAGGTAAATGTCCCACATGTAGAAAGAAGGTTACTGTTAAACAGCTTGTTAGGGTATTTCTCCCATCACCGATCTGA 480 0.3729 MTILDIDLNGLPVADEDDGPSIPLLEVEQPVIIIDDDDVIESSPRAFAEAAKNKSRNRNRSSRQPLNETIINYNFYINLEGGDESSIAMDMIEPPPKEPVFNCPICMGPLGEEIMSTRCGHIFCKNCIKTAINVQGKCPTCRKKVTVKQLVRVFLPSPI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00775 159 PANTHER RING ZINC FINGER-RELATED 57 157 - -
Car03g00775 159 SUPERFAMILY RING/U-box 102 148 - -
Car03g00775 159 SMART ring_2 103 141 IPR001841 -
Car03g00775 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 157 IPR013083 -
Car03g00775 159 Pfam Zinc finger, C3HC4 type (RING finger) 102 141 - -
Car03g00775 159 ProSiteProfiles Zinc finger RING-type profile. 103 142 IPR001841 -
Car03g00775 159 ProSitePatterns Zinc finger RING-type signature. 119 128 IPR017907 -
Car03g00775 159 PANTHER ELFLESS, ISOFORM B 57 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00775 Car-Chr3 41008329 41008808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00775 17 157 C3H Transcription Factor Family AT3G07200 45.098 1.59e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00775 K22651 - jre:109013825 152.525