Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00774 ATGGAATTAGATCCATGTTTTGGAGAAAAACTTTCTATGAATTTTCCTAAAACACCTTCCATAAAATCAGAGATGGTTCCAAGCTCAGTTGTTTcacctccacctccaccaccatcacattacaccaccTTTTTGTACCAAAATCACCATTTTAAGAAACATCATCCTCTGAATAACCACCCTGGTTTCGCTACGAGGGTTCCTTCTTCCTCCTCGATGATCTCTATGATCCCAACACCTTCATACCAACGAGATTTCGTCGATGCTCGAAATCCAATGACCTTTGAACCAAACATGGAATTACCAACCATGCATGGTCGCCTTAACAGTAGCAAAGGGATTTGGGATTTGTCCAACGACAAAAACAATCTCTTTCAATCTCAGGTGGGTGTGGGTCCCACTCTATCTGCACCATCACTCCTTTATGGTGATGGTGCAATTAAGCCTAAGCTTCAAGGTGGAGATTCTTCATGCACCCATGGAAGAATTGGAAACAAACCCCGAGTGAATGATCGAGGGAGGATTCAAATGAATAGCGAAATTCAGCACAAGGATCCCAATAAAATCAAAGGACAATGGACTACGAATGAGGATAGCCTTCTTGTTGAATTGGTGGAGCGATTTGGGCTTAAAAAATGGTCACAGATTGCTAAGTACTTGAATGGAAGGATTGGGAAACAGTGCAGGGAAAGATGGTGTAATCACCTTCGACCCAACATTAAGAAGGAGTCATGGAGTGAAGAGGAAGACAAAACACTGATTGAAGCTCACAAGACAGTTGGAAACAAATGGGCAGAAATTGCTAAGAGATTGCCAGGACGCACTGAGAACTCAATCAAGAACCACTGGAACGCCACTAAGCGTCGGCAGTACGCCAAGAAAAGGCACAACAGGCGAAATAGTTCAAAGGGAATGCTTCTTCAGAAATACATCATGGAAGTTGCGGCGGCGGAGGAAGTGAAAAAGGAGCTGATGAAACAATCCATGAACATGATGAATATTGGGAATCAGCCAAATAACATTACCAATGCAAACTTTGGTGAGTATGAAAGTTCAGATCAGAGTGATTTCAGCTCTGATCAAGGTTGGGGTACTAACCCAGAGGATGATGAACTTGGTGGTGGTGGGTATGTGCCAATGATGTTCAATGATGATGGAATGGGAAGTGGATCTGGTGGCACAATGAGTTATGATCAATTTGGATCATATGGAATGGAGAATATTATTTCTGAGGTTTCTATGAAGAAGGAAATTGATCTCATGGAGATGATCTATAGAAACCCTTAA 1287 0.4079 MELDPCFGEKLSMNFPKTPSIKSEMVPSSVVSPPPPPPSHYTTFLYQNHHFKKHHPLNNHPGFATRVPSSSSMISMIPTPSYQRDFVDARNPMTFEPNMELPTMHGRLNSSKGIWDLSNDKNNLFQSQVGVGPTLSAPSLLYGDGAIKPKLQGGDSSCTHGRIGNKPRVNDRGRIQMNSEIQHKDPNKIKGQWTTNEDSLLVELVERFGLKKWSQIAKYLNGRIGKQCRERWCNHLRPNIKKESWSEEEDKTLIEAHKTVGNKWAEIAKRLPGRTENSIKNHWNATKRRQYAKKRHNRRNSSKGMLLQKYIMEVAAAEEVKKELMKQSMNMMNIGNQPNNITNANFGEYESSDQSDFSSDQGWGTNPEDDELGGGGYVPMMFNDDGMGSGSGGTMSYDQFGSYGMENIISEVSMKKEIDLMEMIYRNP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00774 428 MobiDBLite consensus disorder prediction 337 370 - -
Car03g00774 428 MobiDBLite consensus disorder prediction 337 365 - -
Car03g00774 428 PANTHER MYB PROTEIN-RELATED 171 337 - -
Car03g00774 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 241 291 IPR017930 -
Car03g00774 428 Coils Coil 307 327 - -
Car03g00774 428 ProSiteProfiles Myb-like domain profile. 237 287 IPR001005 -
Car03g00774 428 Gene3D - 243 309 - -
Car03g00774 428 Gene3D - 189 241 - -
Car03g00774 428 ProSiteProfiles Myb-like domain profile. 185 236 IPR001005 -
Car03g00774 428 SMART sant 189 238 IPR001005 -
Car03g00774 428 SMART sant 241 289 IPR001005 -
Car03g00774 428 CDD SANT 244 287 IPR001005 -
Car03g00774 428 Pfam Myb-like DNA-binding domain 193 253 - -
Car03g00774 428 PANTHER MYB DOMAIN PROTEIN 100-RELATED 171 337 - -
Car03g00774 428 CDD SANT 193 236 IPR001005 -
Car03g00774 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 185 240 IPR017930 -
Car03g00774 428 SUPERFAMILY Homeodomain-like 187 283 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00774 Car-Chr3 40926937 40929515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00774 189 311 MYB Transcription Factor Family AT4G18770 71.545 6.44e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g00774 Myb_DNA-bind_6 4.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00774 K09422 - mtr:MTR_4g088015 395.971