Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00769 ATGGACAAGAATAAAGAGTGCAATTCTTCTCAAGATCCTGATGTACGAAAAGGACCATGGACTATGGAAGAAGATTTGATCTTGATCAACTATATTGCCAATCATGGTGAAGGTGTTTGGAACTCCTTAGCTAAATCAGCTGGTCTTAAACGTACTGGAAAGAGTTGTAGACTCAGGTGGCTAAACTATCTTCGACCAGATGTTAGAAGAGGAAATATTACACCCGAGGAACAACTCTTGATCATGGAACTTCATGCAAAGTGGGGAAACAGAGGTTTCAAAATCATTGTTTTTCATTCCCTTGATACTAGAACTGGAGTACTTTTCTCCTTTAAAGGATACAGGTGGTCGAAAATTGCGAAACATCTACCGGGAAGAACTGACAATGAGATAAAGAATTATTGGAGGACTAGGATTCAGAAGCATATCAAACAAGCTGAGAATTCACAGCAACAGAATTGTGATCAAATAAATGATAATAATAATCAAATAGCTAGCAGTAGCCAAGTTTCCAACATGGCTCCTGAGCCAATGGACATCTCTCCAACCCTGTTACCAAGGAGAAATTTTGGAACCATTTTCAAGTCATGA 591 0.3875 MDKNKECNSSQDPDVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRGFKIIVFHSLDTRTGVLFSFKGYRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENSQQQNCDQINDNNNQIASSSQVSNMAPEPMDISPTLLPRRNFGTIFKS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00769 196 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Car03g00769 196 SUPERFAMILY Homeodomain-like 54 106 IPR009057 -
Car03g00769 196 Gene3D - 74 140 - -
Car03g00769 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Car03g00769 196 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 5 96 - -
Car03g00769 196 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 111 175 - -
Car03g00769 196 CDD SANT 19 64 IPR001005 -
Car03g00769 196 SUPERFAMILY Homeodomain-like 17 138 IPR009057 -
Car03g00769 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 143 IPR017930 -
Car03g00769 196 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 5 96 IPR044676 GO:0003700|GO:0006355|GO:0043565
Car03g00769 196 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 111 175 IPR044676 GO:0003700|GO:0006355|GO:0043565
Car03g00769 196 ProSiteProfiles Myb-like domain profile. 65 139 IPR001005 -
Car03g00769 196 SMART sant 16 66 IPR001005 -
Car03g00769 196 SMART sant 69 141 IPR001005 -
Car03g00769 196 Pfam Myb-like DNA-binding domain 70 137 IPR001005 -
Car03g00769 196 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Car03g00769 196 Gene3D - 17 69 - -
Car03g00769 196 CDD SANT 74 137 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00769 Car-Chr3 40591159 40597454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00769 11 154 MYB Transcription Factor Family AT3G01530 64.626 8.31e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g00769 Myb_DNA-binding 3.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00769 K09422 - gmx:778046 250.751