Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00753 ATGAACTGGCAGCATCTTTGCTTGAGTCTTAAGTTTCTATTAAACTCTCATTTTTTCAATTTTATCACACTTCCAAAGGTTAAAAAAATGGGAAGACAACCTTGTTGTGATAAGGTTGGTTTGAAGAGAGGACCATGGACTATTGAAGAAGATCACAAGCTTGTGAGTTTCATCCTCAACAATGGCATTCATTGTTGGAGAATGGTTCCTAAACTTGCAGGTCTTTTAAGATGTGGAAAGAGTTGTAGATTGAGATGGATTAATTATCTAAGGCCAGACCTCAAGAGAGGTAACTATACTGAAATTGAAGAGGATCAAATTATTCAACTACATGCACGTCTTGGTAACAGGTGGTCAAAGATTGCTTCACATTTTCCTGGAAGAACGGACAATGAAATTAAAAACCATTGGAACACTAAAATCAAGAAGAAGCTGAAGTTACTGGGTGTGGACCCTTTGACTCATAAGCCAATTGAGCAAAAGCAACAAATtgatgatgatgatgatgatgaCAAAAATAAAACTAACAAACAACCAAATAATATTTCAGCAGGGTATGAAGAAAATGTGGGAATAAAGTTGTTGGGCAGTGATGGCACCAAAGAAAATAAGGTGACATGGGATGATACTGCTTTTGAAATGTTATGCTCAAATTTGGACTTAGGAACATGGATGAATCAAGACACCAACACTAGCACTAATTCTGTATCTAGTTCTTGTGTTTCTATGGATGATACTAGCCACATTTCTGTTGATGAATCCTCTTACCTTCACCAAAATTCCTTACAAGAATGGGTTAATAGTATGAATTCCATTCTCTCATGGGATGGCTTTAATCCTCTTGACCAAGATATTTCTTTTTTGGAAAGGAATAAGTAA 879 0.3527 MNWQHLCLSLKFLLNSHFFNFITLPKVKKMGRQPCCDKVGLKRGPWTIEEDHKLVSFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGNYTEIEEDQIIQLHARLGNRWSKIASHFPGRTDNEIKNHWNTKIKKKLKLLGVDPLTHKPIEQKQQIDDDDDDDKNKTNKQPNNISAGYEENVGIKLLGSDGTKENKVTWDDTAFEMLCSNLDLGTWMNQDTNTSTNSVSSSCVSMDDTSHISVDESSYLHQNSLQEWVNSMNSILSWDGFNPLDQDISFLERNK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00753 292 PANTHER MYB DOMAIN PROTEIN 40 31 267 - -
Car03g00753 292 ProSiteProfiles Myb-like domain profile. 91 141 IPR001005 -
Car03g00753 292 ProSiteProfiles Myb-like domain profile. 38 90 IPR001005 -
Car03g00753 292 MobiDBLite consensus disorder prediction 156 185 - -
Car03g00753 292 Gene3D - 40 96 - -
Car03g00753 292 MobiDBLite consensus disorder prediction 158 176 - -
Car03g00753 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 145 IPR017930 -
Car03g00753 292 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 31 267 - -
Car03g00753 292 SUPERFAMILY Homeodomain-like 40 137 IPR009057 -
Car03g00753 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 90 IPR017930 -
Car03g00753 292 CDD SANT 45 90 IPR001005 -
Car03g00753 292 SMART sant 95 143 IPR001005 -
Car03g00753 292 SMART sant 42 92 IPR001005 -
Car03g00753 292 Pfam Myb-like DNA-binding domain 43 90 IPR001005 -
Car03g00753 292 Pfam Myb-like DNA-binding domain 96 139 IPR001005 -
Car03g00753 292 Gene3D - 97 182 - -
Car03g00753 292 CDD SANT 98 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00753 Car-Chr3 39753907 39755540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00753 30 162 MYB Transcription Factor Family AT5G16600 77.444 2.08e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g00753 Myb_DNA-binding 3.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00753 K09422 - gmx:100783231 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00753 03 39753907 39755540 Car03g00753 03 39753907 39755540 ECH