Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00732 ATGTGCAACAAGAATAGTACTCCTCCAACAAAAACAAAATCGGTTACTATGAAGAAGAAGAAAAAACAAACCAATAAAGATTCAATTtctacatcttctacttcttcatcttcttcctcttctcttaaacctcaCCGACGTAGAAACAGAACAAAAACAAGAAAACCAAAGTTTCTAAGTCTCCGTCTACAACTATcccaaaaccaaaacaacaaacccaaaaaaacaacaaaacaacaacaggaacctcaacTGAATCATCTGTTCCCTCTACACTCAGAAACCGACATGCAAGAAGAAAACAACGTAGCGTTACTCTTCACCTCCGACGATGGAGCAACGTTAAACGGTCTTTTAGAAGACGATTCGACAACGTTAACGGCGGCAACTTCAGGGGAGGAATCGCTGTCGGTGATGAGGTGTCCGGCGATGGAGGGGTTAGTTAGGAAGGCGATGAGGAAGAGAAGTGATGAAGGGAGTGAAGAGAGATGGGTTAGTTATTCGGAGGTTGTTGAAGAGAAGAAGGAAATGATGGAGGAAGTGAATAGTTGTATTGGGATCGAAACGACATCGTTTGGGTCATTGTCGTTGAAGCTGGATCATGATGGGATATTGAATGCTTGGTCTGATAAAGGTCCTCTTTATGTCGATGCTGGAGATGAGGCCCCACAGACGGTTCCTGATTTGTTCAATGCTTCCTCCTTTCCTCCCAACAATGCGTGGGATGGTTGTGGGTGTGATGTTGTTGGGAACACATGGAAAGTTCCTGAAGGTTGTGGAGCTAACGATATTAAGGTGAAGGAAGAAATGGGTTGGAAGCTTGGGCAGAGAGAAGCAAGTTTGCTTAGATACAAAGAGAAGAGGCAAAGCAGGCTCTTTGCCAAGAGGATTCGTTACGAAGTTCGCAAGTTGAATGCTGAAAAGCGGCCTAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 963 0.3967 MCNKNSTPPTKTKSVTMKKKKKQTNKDSISTSSTSSSSSSSLKPHRRRNRTKTRKPKFLSLRLQLSQNQNNKPKKTTKQQQEPQLNHLFPLHSETDMQEENNVALLFTSDDGATLNGLLEDDSTTLTAATSGEESLSVMRCPAMEGLVRKAMRKRSDEGSEERWVSYSEVVEEKKEMMEEVNSCIGIETTSFGSLSLKLDHDGILNAWSDKGPLYVDAGDEAPQTVPDLFNASSFPPNNAWDGCGCDVVGNTWKVPEGCGANDIKVKEEMGWKLGQREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00732 320 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 38 320 - -
Car03g00732 320 MobiDBLite consensus disorder prediction 43 57 - -
Car03g00732 320 MobiDBLite consensus disorder prediction 1 85 - -
Car03g00732 320 MobiDBLite consensus disorder prediction 27 42 - -
Car03g00732 320 MobiDBLite consensus disorder prediction 60 85 - -
Car03g00732 320 Pfam CCT motif 277 319 IPR010402 GO:0005515
Car03g00732 320 ProSiteProfiles CCT domain profile. 277 319 IPR010402 GO:0005515
Car03g00732 320 PANTHER CCT MOTIF FAMILY PROTEIN 38 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00732 Car-Chr3 38732052 38736090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00732 194 319 C2C2-CO-like Transcription Factor Family AT1G73870 41.406 1.45e-20 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car03g00732 CCT 4.1e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00732 - - gmx:100798231 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00732 03 38732052 38736090 Car03g00732 03 38732052 38736090 ECH