Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00725 ATGACTTGTTGTGAGAAAGCTTTGACTGGTAGAGAGCACCTACTTTTTTATAGAAGACTTAAAAATCTTAAAGGTTCAGTCTTGACTCAAGTAGTAGAAGAATCTTTGACGAGTTTAAACCTTTTCCATGGAGGGGTTGCTGATAAACAAGCTGGAAAATACAGTGGTGGGGTGAAGAGGAGGCTTAGTGTTGCAATTTCATTAATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGTACTAGATTAGACCATGCTTCAAGAAAATGTTTATGGAATGTTATCAAGCTTGCAAAACAGGATCGCGCAATCATTCTGACAACACATTCTATGGAAGAGGTGGAGGCCTTATGCGATCGATTAGGAGTATTTGTAAATGGTAACTTGCAGTGCATCGGAAATCCAAATGAGGTTTGA 420 0.3929 MTCCEKALTGREHLLFYRRLKNLKGSVLTQVVEESLTSLNLFHGGVADKQAGKYSGGVKRRLSVAISLIGDPKVVYMDEPSTRLDHASRKCLWNVIKLAKQDRAIILTTHSMEEVEALCDRLGVFVNGNLQCIGNPNEV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00725 139 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 138 IPR026082 GO:0016021|GO:0055085|GO:0140359
Car03g00725 139 Gene3D - 3 139 IPR027417 -
Car03g00725 139 PANTHER OS08G0398300 PROTEIN 7 138 - -
Car03g00725 139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 134 IPR027417 -
Car03g00725 139 Pfam AAA domain, putative AbiEii toxin, Type IV TA system 52 114 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00725 Car-Chr3 38094123 38095784 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00725 48 139 Calmodulin-binding Proteins AT2G36910 25.000 9.78e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00725 - - gmx:100814329 230.335