Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00717 ATGAGTTGTTTCAGCTGTTGCGAAGAGGATGAGTACCATAAGGCTGCTGAAAGTGGTGGACCATATGTTGTAAAAAATCCTGCTGTTAATTTGACTCATATAAGGAATGATGGAAATTATCATGCTTTTGAGATTGCAAAACAGGGAGCTCAGGCTGTTAAAGTGCAGCCCATTGAATTTCCTGAGATACAGGCAGATGAACTGAAAGAAAGAGTAAAAATTCATGTTGGGGCTGCAAGAGGGCTTAAATACTTGCATGAGAAAGCTGATCCCCATATTAGTCACGAGGACATCAAGTCAAGCAATGTGCTGATCTTTGATGATGATGTTGCTAAAATTGCATATTTTGATTTGTCAAATCAGGCTCTAGACATGGCTGCACGTCTTCATTCCACCCATGTCCTTGGAACCTTTGGTTACCATGCACCAAATAAGGATAAGGTCAGACAGTGTGTTGATACAAGACTAGGAGGAGAATACCCATCAAAAGTTGTTGCTGGGATCCAATGGCTCCGAATCAACATAGCTTTTGCACGTTCAATTCCTGATTCAATGTCAAATTACAATAGTCTCCTGGTGGAGGACAACTTAAGAGCTCAAGCAACAGATAGGATTTTGGTGACTGCACCATTGAAGGACTGCAATTTAGAACACCGGGTCCTTTCTTAA 669 0.4126 MSCFSCCEEDEYHKAAESGGPYVVKNPAVNLTHIRNDGNYHAFEIAKQGAQAVKVQPIEFPEIQADELKERVKIHVGAARGLKYLHEKADPHISHEDIKSSNVLIFDDDVAKIAYFDLSNQALDMAARLHSTHVLGTFGYHAPNKDKVRQCVDTRLGGEYPSKVVAGIQWLRINIAFARSIPDSMSNYNSLLVEDNLRAQATDRILVTAPLKDCNLEHRVLS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00717 222 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 70 - -
Car03g00717 222 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 70 144 - -
Car03g00717 222 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 70 144 - -
Car03g00717 222 Pfam Protein kinase domain 70 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00717 222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Car03g00717 222 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 70 - -
Car03g00717 222 Gene3D Transferase(Phosphotransferase) domain 1 63 164 - -
Car03g00717 222 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00717 222 SUPERFAMILY Protein kinase-like (PK-like) 68 143 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00717 Car-Chr3 37890711 37892891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00717 71 143 Trihelix Transcription Factor Family AT1G68690 54.795 6.48e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car03g00717 Pkinase 1.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00717 K13436 - gmx:100817460 149.058