Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00703 ATGGGAACGAATTCTTCATTGCAACTCATTGTTTGCTTCTATGTCCTACACTTGTTAGCATGGTCAAGGGTTCAAAGATGCCACTGCTTAGTTCCCCAAAGGTCTATTATGAGCATAGGCGGTGTGCTTGATTTGGTTTCATTAATGGGAAAACAACAAAAGATAGCAATGGAAATTGCAGTGCAAGAAATCAACAACCAATTGAGTTTCTCCAAGATGGATTTGAAGATTAAAGATTCACATGGGAATTCAGCTCAAGTAATTGCAAGTGTTATGGATCTCTCACAGAGCAACCAAGTGCTAGCCATCATTGGAACTATTACACACAATGAAGCAAATTTGGCAAGTGAATTCAGTGACACCATAAAGAACATTCCTATTTTGTCTCTAACATCATCTGCGGTCAGACCAGAATTATTATCTCCTAGATTGCCACATTTCATCCAAGTAGGTAATGATATTAACATTCACATGCAATGCATTGCAGCAATTGTAGGAGAATTTAAATGGAAAAAGGTGACAATAATATATGAACTTAATAATGGGTTTTCCTCTGATCCAGGATTACTACTTAGCCTCTCTTATTCTCTTAGACATGTTGGTTCTGAGATTGAAAACCACTTAGCTTTTCCTTCCTTATCAACTCTTTCAGACCCAAAAACTACAATTGAAAATGAGCTTAATAAGCTGAAAAAGAAGAGTAATAGGGTTTTCTTGATTGTTCATTCTTCTTTAGAGATTGCCAGCATGGTTTGTGAGAAAGCAAAGCAAATAGGTTTGATGGAAAAAGGTTCTGTGTGGATTATCCCAGATGAGGTTGCAGGCTTTCTTGATGCAGTTAACTCTTCTGTTATCTTGAACATGCAAGGTATTGTAGGATTTAAAACACACTTCATAGAAACGAGTGAGGCTTTTACAAAGTTTAAATTCAAATTCCAAAGAAGGTTTGCACTAGAATACCCTGAAGAAGATAACATTCACCCAAGTATCTTTGCACTTCAAGCATATGATGCAACTTGGGCTATTGTTGACGCTGCAAATAAATCATCACAAAGTAAGTTCAGTGTTGAACAATTCTCAGAAAATATTTTGTCAAGTAATTTTGACAGACTAAGTGGAAAGACTTTATCAAAGAATGGGCAATTGCTTCAACTGCCATCCTTCAACATAATTAATGTGATAGGGAAAAGTTATAGAGAAATGGCGTTTTGGTCTCCAACAATTGGTTTTTCCAAGAACATTGTTAACCATAAGATAATGGAAATAAACTTAAATAATGATTCTAGTGAAGTTTTTAGAACAATTTATTGGCCTGGAGACTTGCAATTGGTTCCGAAGGGTCACAATAATGAGGAAAAGTCATTGAAAATAGCTATACCTTCCAATGGTGCCTTTACTCAATTTGTGAATGTGACATATGATCAGAGCAAAAATGAAACTTCCATCACTGGTTTCTCTATCAGTGTCTTTGAAGCAGCTGTCAAACATTTACCTTATGATTTACATTACAATTTTGTTCCCTTCAGTGGCTCCTACGATGAAATGGTTGATCAAGTCTACAATAAGACATGGGATGCTGCTGTTGGTGATACATCAATAGTTGCATATAGATATCATCTAGTGGACTTCTCACAACCTTATGTTGAATCTGGCCTCCACATGGTGGTTACTGAACAACCAGCAAAATCAAAAGAAGCATGGATGTTTTTGGATGCCTTTACAAAAGAGATGTGGCTGACAATGGCAGCTATGCATATTTTTGTAGGAGTTGTTATTTGGTTGATTGAACGAGAAGAAAATGCAGATCTAAGGGGATTTGGGTCCATTCTTTGGTTTTTAGTCACTGTACTATTTTATGCACATAGAGAACCAATAAGAAGACCATTGGCTCGAACCGTGTTGGCGCCTTGGCTAATTGCTATTTTCATTGTGACAAATAGTTTCATAGCAAGTTTGACATCCATAACTATTGCACAAGTAAAGCCATCTGTGTTAAATATTCAGACCCTTAAAGAAAGAAACTCACCAGTTGGGTGTGATGGAAATTCATTTATTGTGAAGCATTTGACAGAAGTACTAAAATTCAAGCCTGAGAACATTAGGAAAATAAATTCCATGAGTGACTACCCTGCTGCCTTTGAGAACAAGGATATAGAAGCTGCCTTCTTTGTCGCACCTCATGCAAAAGTCTTTCTAGCAAAGTACTCATGTATGGGCCTCATCAAAGCGGGGAACACTTTCAGGCTTGGTGGCTTTGGTTTTGTATTTCCAAAAGGTTCCAGTTTGGCTGCCGACATATCAGAGGCACTGCTGAATATGATAGAGAGTGGAGAAACAGAACAACTAGAAAAAAATATGTTGAATGAGATTGAGAATGGAAACAAAGTCGATTGCTCTTCTTTAGAGAGCAACAAGGGGAAAAGTAATTCATCAATTGGCCTTCAGCCATTCCTTGTTCTGTTTTCAATATGTTCTACTTTTGCTATTATTGGTTTTTTACATCACATGGTTTGTTTGTTGGTGAAGAATGTAGAGACCTTGACAAGCCAAATAGTTGTAACATTAACACAATTATGGCGAATATGGAGATGGACAACCAAATATTTTTCTCTGTGTTGTTCGAAACTCCAATCAAAGATGATGAGAAGAGTAAGCAGTTGCACAGAAATAAGAAGTGCAGAGGAGAATGTCACTAGTAATAGTCAGCAAAGCCCAGTGATGGTTGAGTTTGTTGATATAGTACTGGCTGCTCATGCTTGA 2760 0.371 MGTNSSLQLIVCFYVLHLLAWSRVQRCHCLVPQRSIMSIGGVLDLVSLMGKQQKIAMEIAVQEINNQLSFSKMDLKIKDSHGNSAQVIASVMDLSQSNQVLAIIGTITHNEANLASEFSDTIKNIPILSLTSSAVRPELLSPRLPHFIQVGNDINIHMQCIAAIVGEFKWKKVTIIYELNNGFSSDPGLLLSLSYSLRHVGSEIENHLAFPSLSTLSDPKTTIENELNKLKKKSNRVFLIVHSSLEIASMVCEKAKQIGLMEKGSVWIIPDEVAGFLDAVNSSVILNMQGIVGFKTHFIETSEAFTKFKFKFQRRFALEYPEEDNIHPSIFALQAYDATWAIVDAANKSSQSKFSVEQFSENILSSNFDRLSGKTLSKNGQLLQLPSFNIINVIGKSYREMAFWSPTIGFSKNIVNHKIMEINLNNDSSEVFRTIYWPGDLQLVPKGHNNEEKSLKIAIPSNGAFTQFVNVTYDQSKNETSITGFSISVFEAAVKHLPYDLHYNFVPFSGSYDEMVDQVYNKTWDAAVGDTSIVAYRYHLVDFSQPYVESGLHMVVTEQPAKSKEAWMFLDAFTKEMWLTMAAMHIFVGVVIWLIEREENADLRGFGSILWFLVTVLFYAHREPIRRPLARTVLAPWLIAIFIVTNSFIASLTSITIAQVKPSVLNIQTLKERNSPVGCDGNSFIVKHLTEVLKFKPENIRKINSMSDYPAAFENKDIEAAFFVAPHAKVFLAKYSCMGLIKAGNTFRLGGFGFVFPKGSSLAADISEALLNMIESGETEQLEKNMLNEIENGNKVDCSSLESNKGKSNSSIGLQPFLVLFSICSTFAIIGFLHHMVCLLVKNVETLTSQIVVTLTQLWRIWRWTTKYFSLCCSKLQSKMMRRVSSCTEIRSAEENVTSNSQQSPVMVEFVDIVLAAHA 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00703 919 CDD GluR_Plant 453 787 - -
Car03g00703 919 Pfam Ligand-gated ion channel 785 824 IPR001320 GO:0015276|GO:0016020
Car03g00703 919 Gene3D - 448 578 - -
Car03g00703 919 Gene3D - 154 326 - -
Car03g00703 919 SUPERFAMILY Periplasmic binding protein-like I 38 446 IPR028082 -
Car03g00703 919 SUPERFAMILY Periplasmic binding protein-like II 450 784 - -
Car03g00703 919 SMART GluR_14 454 789 IPR001320 GO:0015276|GO:0016020
Car03g00703 919 Pfam Bacterial extracellular solute-binding proteins, family 3 479 784 IPR001638 -
Car03g00703 919 Gene3D - 33 153 - -
Car03g00703 919 Pfam Receptor family ligand binding region 54 394 IPR001828 -
Car03g00703 919 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 880 - -
Car03g00703 919 CDD PBP1_GABAb_receptor_plant 38 414 IPR044440 -
Car03g00703 919 PIRSF IGluLR_plant 3 909 IPR017103 -
Car03g00703 919 PANTHER GLUTAMATE RECEPTOR 34 880 - -
Car03g00703 919 Gene3D - 660 750 - -
Car03g00703 919 Gene3D - 751 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00703 Car-Chr3 36343685 36362913 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00703 4 869 Ion Channels AT2G29100 30.253 2.30e-116 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00703 - - mtr:MTR_5g059920 1371.68