Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car03g00702 | ATGTTGATGACTACCACAaatgaagaacattctccgttttcaaccacaaatagagaacgttcttcattttTAGAACATTCTTCATTTTTTGAACAATTCAGTGATGTGGATATTCTAGGCAAAGACAATGAGAAAAATGAAGAGGCTTCTAAGGAGGTTGTTGATTCGGTTGAGGCTAAGATACAAGAGTTGAGGATGGAGCTTGATGAAAAATTCTCTTTAATTGAAATGCTGAAGAATGAGGCGAGTCATTGTAGAGAATCAGAATCAAATGCTTTGGAAATAGTCGACAAATGTCAAATGCAATTAGAAGCTTCAAATAAGACAGTGGAATCGCTTCGGTTAGAAGGCACAAACATTTTAGAAGCTTATCAATTCTTAGCCTTAGAATTGGAACAATCAAAGGCTCAAGTAAAATCATTGGAGGAACTTATGAGAAAAGTTGAGGGTAATTTAGCTAGTGTAGATAATAAGAGTGCACTGGAAGTTGTGGAAAGCGATGAGATAAAACAGCTCAAAGTCGAGCTTGTCCCGATTATAAATGTTTTTGAACAATTGGAACAACCGAGCAGCCCATCCGTGAAGAAGTCAGAAGAGAAAAGTGTAGTAGTTGTACACgaagtgaagtgcaagctttatgtgaagtcaagtgaTAACAGTAAAGTTGAAACGGAAAGAATTATACTCAATGAAGTGCTTGAGCAGCTGAAATGTTCAAGAGAAGGGTTAACATTAGAGGAAGGATCAAATCATCTCCAATTATTTGGACCAAACAAGTTGGAAGAGAAAAACGAGAGCAAATTTTTGAAGTTCTTAGAGTTTATGTGGAACCCTTTATCATGGGTCATGGAAGCTACTGTATTAATAGCAATTGCTTTGGCTAATGGTAGTGGAAGACCTCGTGATTGA | 909 | 0.3344 | MLMTTTNEEHSPFSTTNRERSSFLEHSSFFEQFSDVDILGKDNEKNEEASKEVVDSVEAKIQELRMELDEKFSLIEMLKNEASHCRESESNALEIVDKCQMQLEASNKTVESLRLEGTNILEAYQFLALELEQSKAQVKSLEELMRKVEGNLASVDNKSALEVVESDEIKQLKVELVPIINVFEQLEQPSSPSVKKSEEKSVVVVHEVKCKLYVKSSDNSKVETERIILNEVLEQLKCSREGLTLEEGSNHLQLFGPNKLEEKNESKFLKFLEFMWNPLSWVMEATVLIAIALANGSGRPRD | 302 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car03g00702 | 302 | Coils | Coil | 124 | 158 | - | - | |
| Car03g00702 | 302 | PANTHER | PLASMA MEMBRANE ATPASE | 214 | 302 | - | - | |
| Car03g00702 | 302 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 214 | 302 | - | - | |
| Car03g00702 | 302 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Car03g00702 | 302 | SMART | Cation_ATPase_N_a_2 | 223 | 295 | IPR004014 | - | |
| Car03g00702 | 302 | Coils | Coil | 47 | 81 | - | - | |
| Car03g00702 | 302 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 229 | 294 | IPR023298 | - | |
| Car03g00702 | 302 | Coils | Coil | 96 | 116 | - | - | |
| Car03g00702 | 302 | Gene3D | - | 274 | 302 | - | - | |
| Car03g00702 | 302 | Pfam | Cation transporter/ATPase, N-terminus | 229 | 289 | IPR004014 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car03g00702 | Car-Chr3 | 36286025 | 36287020 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car03g00702 | 222 | 302 | Primary Pumps ATPases | AT2G07560 | 70.370 | 2.89e-32 | 124 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car03g00702 | K01535 | - | cam:101490595 | 198.749 |