Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00640 GTACAATCAGTGGCTACAAAAATTAGCATTCATTAGCAGTCGTGAGAGTGTGGGTTATGGTTTCTGGAACCTGAGCTTTAACACCCTTTACCGGTCAACTCAGATATTTGCAGTGCTTTTAGGTGGAATGTCTGTTTTCAGTTGCGGTGTAACTGTTGAGCAACTTACTAAGTATGTATTATACTGTGAGTGGTTGATTTATGCTACTTGGAGGGTAACAAACAGCTTATCATCATTACTGCAGTCCATTGGAGCATCTGAAAACATTTTCCATATGATGAATTTATTGCCCTGCGACCAATTCCTATCCAAAGGCAAGAAAATATTTGTGTCCCTTTCTCTTGCTACTCATAAGGTATGGAATCATATATTGTTTAATTGTGCTTTCCCACATCAAACAGGAATTAAGTTGCAGAGGTTAATGGGCCATATTCAGTTTGTAAATGTATCATTTCATTATCCTGCAAGGAGTATGATCCCTGTTCTGGAACACTTAGACTTCTCTGTAAAAGCAAATCAAGTCATTGCCATTGTTGGTCTGAGTGGTAGTGGAAAGAGCACACTAGTCAACCTTTTACTTCGACTCTATGAGCCTAGTAGCGGTCAGATATGTATTGATGGTTTCCCTCTTAAGGAGTTGGATATCAGGTGGCTGAGGCAGAAGATTGGATATGTTGCCCAGGAACCCCGTATCCTTCACATGGACATAAAGTCAAACATAAAATATGGTTGCCCCATGAACATAAATCAAGAAGATATTAAACAGGCTGCAAAACTTGCCTATGCTCATGACTTTATTTCTTCACTTCCAAATGGCTATGAAACCCTTGTTGATGACAATGCACTTAGCGGGGGGCAAAAGCAGCGAATTGCCATTGCAAGGGCCATTCTTAGGGACCCAGTTATTTTGATACTTGATGAACCAACCAGTGCCTTGGATTCTGAAAGTGAGCATTACATCAAGGAGGTATTGTATGCATTAAAAGATGAAACTAAATCAAGAACCATCATTATTGTTGCACATAGTCTTTCTACCGTAAAAGCTGCTGACGGGATCATAGTTATGGATAATGGTTGCATTATTGAGATGGGTAACCATGATGAGCTTCTGGTCAAGGATGGGCTTTATGCCAAGTTAAACAGAATTCAAGCAGATATTTTAACTTGA 1168 0.3964 YNQWLQKLAFISSRESVGYGFWNLSFNTLYRSTQIFAVLLGGMSVFSCGVTVEQLTKYVLYCEWLIYATWRVTNSLSSLLQSIGASENIFHMMNLLPCDQFLSKGKKIFVSLSLATHKVWNHILFNCAFPHQTGIKLQRLMGHIQFVNVSFHYPARSMIPVLEHLDFSVKANQVIAIVGLSGSGKSTLVNLLLRLYEPSSGQICIDGFPLKELDIRWLRQKIGYVAQEPRILHMDIKSNIKYGCPMNINQEDIKQAAKLAYAHDFISSLPNGYETLVDDNALSGGQKQRIAIARAILRDPVILILDEPTSALDSESEHYIKEVLYALKDETKSRTIIIVAHSLSTVKAADGIIVMDNGCIIEMGNHDELLVKDGLYAKLNRIQADILT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00640 388 PANTHER ATP-BINDING ABC TRANSPORTER 1 386 - -
Car03g00640 388 Pfam ABC transporter 162 310 IPR003439 GO:0005524
Car03g00640 388 Gene3D - 142 383 IPR027417 -
Car03g00640 388 PANTHER ABC TRANSPORTER B FAMILY 1 386 - -
Car03g00640 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 383 IPR027417 -
Car03g00640 388 SUPERFAMILY ABC transporter transmembrane region 2 97 IPR036640 GO:0005524|GO:0016021
Car03g00640 388 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 144 382 IPR003439 GO:0005524
Car03g00640 388 Gene3D ABC transporter type 1, transmembrane domain 1 141 IPR036640 GO:0005524|GO:0016021
Car03g00640 388 ProSitePatterns ABC transporters family signature. 282 296 IPR017871 GO:0005524
Car03g00640 388 SMART AAA_5 171 359 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00640 Car-Chr3 33035197 33052703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00640 132 383 Calmodulin-binding Proteins AT2G36910 49.219 2.54e-72 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00640 - - gmx:100797529 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00640 03 33035197 33052703 Car03g00640 03 33035197 33052703 ECH