Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00636 ATGGAGTCACTTGTTGACGACAGAGTTGAGTCTTTATCAGAGGTTAAAAGTTCAGTTTCTGGCATAAATCACAATCCTCCTTCAACGTCTCAGCTACCTGTAAGAGCATCTAGAAATCAAGGGCCTTCTTCCAATCATCAAAATCATGGAAGGTTGAAGGATTCATATCACGAGGATGACGATGTGGACTACAAAGGATCGACTAAAATGGAGAAGCAATATTATAACCCTAATGGTAAATCTGACTATGTGAGCCAAACTGAAACATTTGAAAGTTGTTTGGCAAAGAATATTTCCACAATCGAAACAAAACTGTGCATCTATGATTCCAAGAATCACAATTCCAGTGATATATTAGAATCTGACGATTCCATAACAAAAGGAGTTGTTGATCAGACAAACACAGAGATTACATTTTGCTCAAGTCCTCAGAGCAGTTTATATTCTACCACCGTCTATTCAGAAGCCAAAGAAAGTTTCACCAACACTGGAATCAATGAATGTGTTAGTGTTGATAAGTCGGTCGAAAGCGGAGGAGAGGTTACTAATTCGTGTGAATTTAATGAGAGCAGGAAGACCAGCATCTGTAGAGGGAGTACCGGAAGTGATGTTAGTGATGAGAGCAGCATTAGTAATTTGAGCAGTTCTTTGTATAAACCTCACAAGGCAAACGATATAAGATGGGAATCGATTCAAGCGATCCGAGTTCGGGACGGGGGATTGGAAATGAAACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGATATAGGAAGTGTATATCTAGCAGAGTTAAGCAGCACAAAGACTTGTTTTGCAATGAAAGTAATGAACAAGACAGAACTGGCGAATCGAAAGAAGCTTCCGAGGGCTCAGACCGAGAGGGAGATATTGCAGTCATTAGATCATCCGTTTCTACCCTCGTTATATACACATTTTGAGACAGAGTCCTTCTCTTGCTTGGTTATGGAGTTTTGTCCCGGTGGCGATCTCCATGCGCTCCGACAAAGACAACCTGGGAAGTATTTTTCCGAACATGCTGCAAGGTTTTATGTGGCAGAAGTTCTCCTCGCTTTGGAATACTTGCACATGCTCGGAATCATCTACAGAGATCTCAAACCAGAGAACGTCTTAGTGAGAGAAGACGGTCACATAATGCTATCAGATTTTGATCTCTCTCTAAGATGTGCCGTTAGTCCAACTCTGGTAAAGTCGTCAAACTCTAGCTTGGAGACAAAAAGCTCAGGTTACTGCATTCAACCTGCTTGCATCGAACCAACGTGTGTAATCAAGCCAAACTGCATTCAACCTTCATGTTTCACGCCTCGTTTTCTATCAAGCAAATCCAAGAAGAAAGAAAAGAAGTCGAAACCTAAGAACGACGTGCACAATCAGGTGACGCCTCTCCCTGAGCTTATTGCCGAGCCCTCAAATGCTCGATCAATGTCCTTCGTGGGCACACACGAGTACTTGGCCCCCGAAATCATCAAAGGTGAAGGTCATGGAAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTATACGAGCTTTTATTTGGTAGAACACCATTCAAAGGATCGGCAAATCGAGCAACTCTATTTAATGTAGTCGGGCAGCCCTTAAGGTTTCCAGAATCCCCTAGTGTCAGCTTTGCTGCACGGGACTTGATCAGAGGTTTACTTGTAAAAGAGCCTCAGAACCGTCTTGCCTATAGACGCGGAGCTACTGAGATAAAACAACATCCATTCTTTCATAATATTAACTGGGCTCTGATCCGTTGCGCAACTCCACCAGAAGTGCCGAGACAGGCCATGAAGGCACTCACAACTGAGAAGAAGGTGCCTGGAGTGAAGCCTTCCGGTAACTATTTAGATATTGATTTCTTTTGA 1890 0.428 MESLVDDRVESLSEVKSSVSGINHNPPSTSQLPVRASRNQGPSSNHQNHGRLKDSYHEDDDVDYKGSTKMEKQYYNPNGKSDYVSQTETFESCLAKNISTIETKLCIYDSKNHNSSDILESDDSITKGVVDQTNTEITFCSSPQSSLYSTTVYSEAKESFTNTGINECVSVDKSVESGGEVTNSCEFNESRKTSICRGSTGSDVSDESSISNLSSSLYKPHKANDIRWESIQAIRVRDGGLEMKHFRLLKKLGCGDIGSVYLAELSSTKTCFAMKVMNKTELANRKKLPRAQTEREILQSLDHPFLPSLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSSLETKSSGYCIQPACIEPTCVIKPNCIQPSCFTPRFLSSKSKKKEKKSKPKNDVHNQVTPLPELIAEPSNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNINWALIRCATPPEVPRQAMKALTTEKKVPGVKPSGNYLDIDFF 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00636 629 CDD STKc_phototropin_like 244 604 - -
Car03g00636 629 Gene3D Transferase(Phosphotransferase) domain 1 330 397 - -
Car03g00636 629 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 43 629 - -
Car03g00636 629 Gene3D Transferase(Phosphotransferase) domain 1 478 602 - -
Car03g00636 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Car03g00636 629 MobiDBLite consensus disorder prediction 1 63 - -
Car03g00636 629 SUPERFAMILY Protein kinase-like (PK-like) 219 605 IPR011009 -
Car03g00636 629 PANTHER FLIPPASE KINASE 1-RELATED 43 629 - -
Car03g00636 629 SMART serkin_6 246 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00636 629 Pfam Protein kinase domain 247 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00636 629 Pfam Protein kinase domain 481 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00636 629 Gene3D Phosphorylase Kinase; domain 1 244 329 - -
Car03g00636 629 ProSiteProfiles Protein kinase domain profile. 246 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00636 629 MobiDBLite consensus disorder prediction 14 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00636 Car-Chr3 32870897 32874952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00636 85 629 AGC Kinase Gene Family AT5G47750 64.235 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car03g00636 Pkinase 6.4e-38 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00636 03 32870897 32874952 Car03g00636 03 32870897 32874952 ECH