Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00628 ATGGCTAGGAGCTGGCTTATTGACATAGGAGGATTTGCAAAGAAAGTAAAAAGCACTACACTATCTTCAGCTGATCAGATTAAGGATTGTGGTGCATATCGCGAATGCCCAAACTGTCATTATCGTATAGATAACAGTGATGTTTCTACTGAGTGGCCTGGTTTTCCCCTTGGTATAAAGTTTGATCCTTCTGATGTAGAACTATTAGAACATTTAGCGGCTAAATGTGGCGTTGGGAACACAAAGCCACACATGTTTATCGAGGAGTTCATCCCGACCTTGGAAGGAAACCAAGGCATTTGCTATACGCATCCTGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGTAGTGTCCATTTCTTTCACAGAACAATCAATGCATATAGTACTGGTCAACGAAAGCGTCGGAAGATTCATCATCATCGTGGTTTGACTGAAGAGCATGTACGCTGGCACAAGACTGGCAAGACCAAAGCTGTATTTGAAGATGGAGTACATAAGGGCTTTAAGAAGATCATGGTTCTGTATATAAGATCTGAGAAAGAGTCTAAGTCCTACAAATCCAACTGGAAAATGCATCAGTACCATCTAGGGATCAATGAAGATGAGAAGAATGGAGAATATGTGGTTTCGAAAATATTTTATAAACAGGTTGAGAAAAATGAGGAGAAACCATTGGCCGAAGAACCTGACAATGTAACATCGCGGACAAGTCCAAcaactccaaaaccaaatcctccaaatccaCCGCGTACTGGAATATGTGTTGAAAATGATGATAACATCGATGAAACTGCTCTTTTATTGTTTGCAGAGGATGCAAAGTCTATCCCTGGAGAATCACATGCCCCACAATCTGATATTCAGGATCAGGAGAATACACCCAACCCTGCTTGGTTTGCTGGTGAATCACAGGCTATAGAAAATTCTGAATATGATGGCTTGGATGACATTTTATTATGCAAGGAGATATTAGATTCATTTGCTCTATTTGATGATTCTGGATTGGACTCAATCACTACCAATGACTTTGATTACTATGAAAACAAAATGACAGGAAATGGTAATGTAACTTCAACTTCTGTCCTGGATACACTGGAATTGGATACTCCTCCAGATTTTGATCTTTCGAATTTGACATTTTGTTCTCAAGACAGTATCCTTGATTGGATGGACAGGTTATGA 1185 0.3882 MARSWLIDIGGFAKKVKSTTLSSADQIKDCGAYRECPNCHYRIDNSDVSTEWPGFPLGIKFDPSDVELLEHLAAKCGVGNTKPHMFIEEFIPTLEGNQGICYTHPENLPGAKKDGSSVHFFHRTINAYSTGQRKRRKIHHHRGLTEEHVRWHKTGKTKAVFEDGVHKGFKKIMVLYIRSEKESKSYKSNWKMHQYHLGINEDEKNGEYVVSKIFYKQVEKNEEKPLAEEPDNVTSRTSPTTPKPNPPNPPRTGICVENDDNIDETALLLFAEDAKSIPGESHAPQSDIQDQENTPNPAWFAGESQAIENSEYDGLDDILLCKEILDSFALFDDSGLDSITTNDFDYYENKMTGNGNVTSTSVLDTLELDTPPDFDLSNLTFCSQDSILDWMDRL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00628 394 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Car03g00628 394 MobiDBLite consensus disorder prediction 221 253 - -
Car03g00628 394 Gene3D NAC domain 64 220 IPR036093 GO:0003677|GO:0006355
Car03g00628 394 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Car03g00628 394 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 392 - -
Car03g00628 394 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 392 IPR044799 GO:0003700
Car03g00628 394 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00628 Car-Chr3 32190567 32195568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00628 36 234 NAC Transcription Factor Family AT1G28470 49.758 4.22e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car03g00628 NAM 7.7e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00628 03 32190567 32195568 Car03g00628 03 32190567 32195568 ECH