Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00625 atgggatttcagttctTTATTGAATCTGTGATTAGAACTGCTCTCGATCAGTTTGCAGCTGTGAAAAATGTCAAGTTTATCCCCAATTACCTAGGACCAAGCAATTTGCCGCAATGTTCATTGGTGGAATTGGATTCTGCCAAGAAGGTCAAGGAAGTGAGAGCAGTGATTAGGCAGTATCCTTTCATGATGTCTGGGATGCCACGGCCCGTAAGAGCTCGTCCTGCTGTAGCGGAAATGTTTGATGATCGGCCAGTAAAGCCTAAGAGAAAGATGAAGTGTTGTTGGTTGGAGAAAAATGACCCTGATTTTGAGGTGGCAAGGAAGCTGAAGAATCTGACACGTAAAGATGTTGCAGAATACCATTCATGCACAAAGAAGGGAACATTCTTGTTTAAAGTGTGTGTTGTGGGAGAGTTTGGTAGTGTCAAAAACTGCCCTAAAGTGAGTCATGTTTTTCAAGTTCATTTAAAAGAAGAAGAAGCTCAGCAGGCAAAAACACTTAAGTGGGCTCCTTGTCATTCAATCATAGCAACACCATTGCTTCTGGCATTTGAGCTTCTTCTATGTATACATCTTGGGAGCAGTTATGTGGTGAATTTAAAGATTGTCTTCATACCTCTTATAACTTTTGAATTGATGATTTTGATTGATAACATCAGGATGTGTAGAGCTTTAATGCCTGGAGATGAGGAAAATATGACTGATGAAGCAATATGGGAAACTCTTCCTGTAAGATACCATTCATTAGTTCATTAA 759 0.3913 MGFQFFIESVIRTALDQFAAVKNVKFIPNYLGPSNLPQCSLVELDSAKKVKEVRAVIRQYPFMMSGMPRPVRARPAVAEMFDDRPVKPKRKMKCCWLEKNDPDFEVARKLKNLTRKDVAEYHSCTKKGTFLFKVCVVGEFGSVKNCPKVSHVFQVHLKEEEAQQAKTLKWAPCHSIIATPLLLAFELLLCIHLGSSYVVNLKIVFIPLITFELMILIDNIRMCRALMPGDEENMTDEAIWETLPVRYHSLVH 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00625 252 Pfam Transmembrane Fragile-X-F protein 159 248 IPR019396 -
Car03g00625 252 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 7 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00625 Car-Chr3 31729488 31732218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00625 170 244 C3H Transcription Factor Family AT1G18470 67.500 2.25e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00625 - - cam:101507716 258.455