LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car03g00613	ATGCCTGAAGAAACACCGTCGATTGATTACGCAATGGAAGCAGCATCTGGGCCCCACTTCTCCGGCCTTCGGCTCGACGGCTTACTTCCATCTTCTCCCTCAACCTCTTCTCTCGCTCCCGTTTCAACCCTAACCACCACCGACTCTCTTCCCAATCAACAACCCTTCGTTATTGGAGTTTCTGGTGGAACTGCTTCTGGAAAAACCACCGTTTGTGATATGATCATTCAACAGCTTCATGATCACCGTGTCGTACTTGTCAATCAGGATTCTTTTTATCGCGGGTTGAAACCAGAAGAATTGAAACGCGTGCACGAGTACAATTTTGACCACCCTGATGCTTTTGACACAGAGCAACTGTTAGAGTGTATGAAGAAGCTGATCAGTGGCCAGAGAGTCAAAGTTCCCATTTACGATTTCAAGAAACACCAACGCTCTTCTGACAGTTTTCGTCAGGTCAATGCCTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAAGATGTTCGGGATCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGGCGTGACACAGTGGAGAGGGGCAGAGACATAAACTCTGTTCTTGAAATGTATGCAAAGTTTGTTAAGCCTGCTTTTGATGACTTTGTTCTACCATCAAAGAAGTATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTGCAACACATCCGCACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAACGTGTACGTTATTCAATCTACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAGAGAAATATCAAAGCATGATTTTGTATTTTATTCTGATCGACTTATACGCCTGGTTGTTGAGCATGGTTTAGGTCATCTGCCTTTTACTGAAAAACAAGTTGTTACTCCAACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTATGTGGTGTTTCAATTATTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCACCGGGATGGAGACAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATCTCAGAACGTCATGTCTTGCTTCTCGACCCTGTCCTCGCTACAGGTAACTCAGCCAACCAAGCAATTGAATTACTCATTCAAAAAGGAGTACCAGAATCCCACATTATATTCTTGAATCTCGTTTCAGCTCCCGAGGGAATCCAATGTGTGTGTAAAAGGTTCCCATCATTGAAAATTGTCACATCGGAGATTGATGTTGCATTAAATGACGAGTTTCGTGTTATCCCTGGATTGGGTGAATTTGGCGATCGCTACTTTGGCACCGATGATTGA	1431	0.4242	MPEETPSIDYAMEAASGPHFSGLRLDGLLPSSPSTSSLAPVSTLTTTDSLPNQQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLKPEELKRVHEYNFDHPDAFDTEQLLECMKKLISGQRVKVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEMYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDREISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLVSAPEGIQCVCKRFPSLKIVTSEIDVALNDEFRVIPGLGEFGDRYFGTDD	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car03g00613	476	CDD	UMPK	57	255	IPR000764	-
	Car03g00613	476	Pfam	Uracil phosphoribosyltransferase	273	474	-	-
	Car03g00613	476	PANTHER	URIDINE KINASE	24	473	-	-
	Car03g00613	476	CDD	PRTases_typeI	332	447	IPR000836	-
	Car03g00613	476	Pfam	Phosphoribulokinase / Uridine kinase family	57	243	IPR006083	GO:0005524\|GO:0016301
	Car03g00613	476	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	49	248	IPR027417	-
	Car03g00613	476	Gene3D	-	259	474	IPR029057	-
	Car03g00613	476	SUPERFAMILY	PRTase-like	258	475	IPR029057	-
	Car03g00613	476	TIGRFAM	udk: uridine kinase	53	255	IPR000764	-
	Car03g00613	476	PRINTS	Uridine kinase signature	55	72	-	-
	Car03g00613	476	PRINTS	Uridine kinase signature	85	96	-	-
	Car03g00613	476	PRINTS	Uridine kinase signature	130	145	-	-
	Car03g00613	476	PRINTS	Uridine kinase signature	187	197	-	-
	Car03g00613	476	PRINTS	Uridine kinase signature	201	212	-	-
	Car03g00613	476	PRINTS	Uridine kinase signature	223	236	-	-
	Car03g00613	476	PANTHER	URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC	24	473	IPR029930	GO:0004849\|GO:0044206
	Car03g00613	476	Gene3D	-	51	258	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car03g00613	Car-Chr3	30676599	30684730	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car03g00613	1	476	PRT Gene Family	AT5G40870	85.921	0.0	837

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car03g00613	K00876		-	gmx:100780005	873.233