Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00610 ATGCTACCTTTGATGCCAAAATCATTAGTCACAATATTGCTAAGTAAAAATTCATTCTCAGGTGAGATTCCTAGTGAGTTTGGTGAATTGAACCAGCTTCAAAATCTTGATATTTCATCAAATAGTCTTAATGGGGTGCCACCATTTTCTTTGTTCTCTTTGAATAACATTAGTTATTTGAATTTAGCAAACAATGTTCTAAGTGGTTCTCTTCCATATAAACTAAAATGTGGAACCAAACTTGGGTTTCTTGATATTTCTAATAACATGTTAAGTGGTTTAGTTCCTTCTTGTTTGGAAAGTAGTTTTGATAGAAGAGTTGTTAGATTTGGTGGAAACTGTTTTTCTAATGATTCTCAAACTCAGAAGCATGGTTCTTATTGTGAAGAATTTAGTTCAGGAAGGAAGAGATTTTGGAATTGGGAAATCGATGCAGATTTTGGGATCATTGCTGTGGTTGTTCTTTTAGTGTTCGGTTTTGGAGTTTTGTTTTATAGAAAGAATCATTCAAGAGAGATATATAGGCATGAGATGTTGCCAAAGATTGTTCAAGATGATTACAACTCAACAACAGGAGTTTCCTCTGAACTTCTTGCTAGTGCTAGATTCATTTCTCAAACAATGAAGCTCGGAAAACAAGCTACTCCTATTTGTAGACACTTTTCGATTGAAGAGTTGAAGGAAATCACAAGAAACTTTGATTTGTCAACTTATATTGGTGAAGGAACCATAGGAAAGTTGTACAAAGGTAAACTAGAGAATGGATCTTATGTGATGATAAGATCTTTGGCTCTGAAAAAGAAGTTTTCAATACAAAATCTCAAAGCTGGGTTGGATTTACTCTCAAAGCTTCACCATCCAAATTTGGTTAGTCTCTTGGGTCATTGTATTGATCATAGTGCATCAGATGGTACAAGTATCCACAAACTTCATCTTGTATACAAGTATGTGCAAAATGAAAATTATCGTATGCATTTGTCAGAATTTTCACAAGATAAGGCACTAAAATGGTCTGATAGATTGGCGATTTTAATTGGAGTTGCCAAGGCTGTGCATTTTTTACATACTGGAATTAAACCAGTTTGTTTTAGAAATCGTTTAAAGACGAACAATGTTTTACTTGACGAACATCGCATTCCAAAACTAAGTGACTATGGTATGTATGTGATTACCGAAGAGATCGAAAATATTGAGGCAAAGGGAGAGGATCCAAAATCTTGGCAAAGGGAAGAATTAGAGGATGCTGTATACAATTTTGGATTCATATTGTTTGAGTCACTTGCTGGACCCATAGCAATTTTTGTTGGTTCTGGGTTTGGAGTTTTGAGTAGAGAACGTTCTTGGGTTGGGGGTTTGGACGAAGAACCTTATGGGGTTGGGGGTTTGGACGAAGAACGTTATGGGTTTGAAGTTTTCTTTGTTAATTCTTTAGGGTTTTTTTAA 1443 0.3514 MLPLMPKSLVTILLSKNSFSGEIPSEFGELNQLQNLDISSNSLNGVPPFSLFSLNNISYLNLANNVLSGSLPYKLKCGTKLGFLDISNNMLSGLVPSCLESSFDRRVVRFGGNCFSNDSQTQKHGSYCEEFSSGRKRFWNWEIDADFGIIAVVVLLVFGFGVLFYRKNHSREIYRHEMLPKIVQDDYNSTTGVSSELLASARFISQTMKLGKQATPICRHFSIEELKEITRNFDLSTYIGEGTIGKLYKGKLENGSYVMIRSLALKKKFSIQNLKAGLDLLSKLHHPNLVSLLGHCIDHSASDGTSIHKLHLVYKYVQNENYRMHLSEFSQDKALKWSDRLAILIGVAKAVHFLHTGIKPVCFRNRLKTNNVLLDEHRIPKLSDYGMYVITEEIENIEAKGEDPKSWQREELEDAVYNFGFILFESLAGPIAIFVGSGFGVLSRERSWVGGLDEEPYGVGGLDEERYGFEVFFVNSLGFF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00610 480 Pfam Protein tyrosine and serine/threonine kinase 235 407 IPR001245 GO:0004672|GO:0006468
Car03g00610 480 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 2 437 - -
Car03g00610 480 Gene3D Ribonuclease Inhibitor 2 132 IPR032675 -
Car03g00610 480 ProSiteProfiles Protein kinase domain profile. 233 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00610 480 SUPERFAMILY L domain-like 7 118 - -
Car03g00610 480 Gene3D Phosphorylase Kinase; domain 1 195 316 - -
Car03g00610 480 SUPERFAMILY Protein kinase-like (PK-like) 215 395 IPR011009 -
Car03g00610 480 Gene3D Transferase(Phosphotransferase) domain 1 319 435 - -
Car03g00610 480 PANTHER OS07G0166700 PROTEIN 2 437 IPR045272 GO:0004714|GO:0006468
Car03g00610 480 Pfam Leucine rich repeat 32 91 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00610 Car-Chr3 30524521 30542081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00610 8 96 Miscellaneous Gene Families AT5G14210 35.955 1.69e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Car03g00610 PK_Tyr_Ser-Thr 2.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00610 - - cam:101499671 864.374