Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00598 ATGGAGTTGCAGAGTGAGAATAATAGTGGTAGAATAATAATTGACCCAAGAAGTGGTTTTTGCAGTTCCAATTCAATTTTCTACAGCAAGAGAAAACCCCACTCACTCCCTCCAAATCACTCCTTAGATGTCACAACTTTCATCTCCTCCTGCTCCCATCACGGCCGCATTGCCTTCATTGATGCCTCCACCGGCCAACACATCACCTACCAACAACTCTGGCGTGCCGTCGAAGCCGTCACTTGCTCTCTCTCCAACATGGGAATCCGAAAGGGTGACGTCATCCTCATCCTCTCTCCCAATTCAATCTATTTCGCGGTGGTGTGTCTCTCCATCTTGTCCCTCGGCGCAATCATCACCACCACCAATCCTCTCTACACAACACGCGAAATCGCCAAGCAGATCGCCGATTCTAAACCCGTCCTCGCTTTCACAACTTCTCCCCTCGCTCCCAAAATCAACAAAGCATCACCCACCCTTCCAATCATTCTCATTGAATCCGAAGATAACTCATCAAACACAGTGGAGAAAATGATGAAGGAAGAACCAGAGTTAAGTAGAGTGAGGGAACGAGTGAACCAAGACGATATAGCTACTTTGCTTTACTCATCTGGAACAACGGGAGTCAGCAAAGGTGTGATATCTTCTCATAAGAATCTCATAGGAATGGTTCAAAACATAATGGTAATGTTCGGTAAAGAACAAGAGGAACATGGACAAACGTTTATATGCACTGTTCCAATGTTTCATATGTACGGTCTTGCGTTGTTCGCTACGGGGCTTCTCGCTTTGGGTTCAACCATTGTTGTTCTCTCCAAATTCGAGATGCATGATATGCTTTCATCGATTGAAAAATTCAGAGCATCATTTGTACCGCTTGTGCCTCCCATATTGGTGGCTATGATTAACAACGCTGATGCGATTAAGAGTAAGTATGATTTGAGTTCCCTTCATTCGATGTTCTCAGCTGGGGCTCCTCTTAGCAAAGAGGTTATAGAAGGGTTTATTGAAAAGTACCCAAATGTTACGATACTTCAAGGTTATGGTCTAACAGAAACCTCTGGATTTGGGGCTTCCACTAATTGTTTTGAAGAGAGTCGTAAGTATGGTACGACGGGGCTTTTGTCTTCTTCAACGGAGGCTATGATTGTCGACATTGACACTGCTCAACCACTGGCTATTAATCAGACGGGTGAACTTTGGCTCCGGGGTCCCACTATCATGAAAGGTTATTTAAGAAACGAGGAGGCAACTAAATCAACCCTGACTTCAGATGGTTGGTTAAAAACAGGGGATGTTTGCTATATTGATAGCGATGGATACTTATTTGTAGTTGATCGCTTGAAAGAGCTAATTAAATACAAGGGATATCAGGTCCCTCCAGCAGAACTTGAGGCTCTGTTGCTGACTCATCCTGCTATTCTAGATGTTGCTGTTATACCGTATCCAGATAAAGAGGCTGGTCAAATTCCAATGGCATATGTAGTGAGGAAGGCTGGAAGTAGTATATCAGAAAAACAAGTTATAGATTATGTTGCAGGACAGGTTGCTCCATACAAAAAAATTCGAAAAGTGACATTTATATCTTTCATACCTAAAAATCCGTCTGGTAAAATTCTTCGGAAGGATCTCGTCAAACTCGCTAGAGCTAAACTCTAA 1659 0.4328 MELQSENNSGRIIIDPRSGFCSSNSIFYSKRKPHSLPPNHSLDVTTFISSCSHHGRIAFIDASTGQHITYQQLWRAVEAVTCSLSNMGIRKGDVILILSPNSIYFAVVCLSILSLGAIITTTNPLYTTREIAKQIADSKPVLAFTTSPLAPKINKASPTLPIILIESEDNSSNTVEKMMKEEPELSRVRERVNQDDIATLLYSSGTTGVSKGVISSHKNLIGMVQNIMVMFGKEQEEHGQTFICTVPMFHMYGLALFATGLLALGSTIVVLSKFEMHDMLSSIEKFRASFVPLVPPILVAMINNADAIKSKYDLSSLHSMFSAGAPLSKEVIEGFIEKYPNVTILQGYGLTETSGFGASTNCFEESRKYGTTGLLSSSTEAMIVDIDTAQPLAINQTGELWLRGPTIMKGYLRNEEATKSTLTSDGWLKTGDVCYIDSDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDVAVIPYPDKEAGQIPMAYVVRKAGSSISEKQVIDYVAGQVAPYKKIRKVTFISFIPKNPSGKILRKDLVKLARAKL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00598 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 551 - -
Car03g00598 552 Gene3D - 450 551 IPR045851 -
Car03g00598 552 Gene3D - 24 449 IPR042099 -
Car03g00598 552 Pfam AMP-binding enzyme 53 454 IPR000873 -
Car03g00598 552 SUPERFAMILY Acetyl-CoA synthetase-like 53 548 - -
Car03g00598 552 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Car03g00598 552 CDD 4CL 36 544 - -
Car03g00598 552 PANTHER BNAA06G14440D PROTEIN 12 551 - -
Car03g00598 552 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00598 Car-Chr3 29264720 29267880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00598 12 552 Monolignol Biosynthesis Gene Families AT1G20500 63.455 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00598 K10526 - gmx:100811344 802.357