Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00595 ATGAATTATGCAACAAATCACTTATATTCACAAGATTTGGATATTGACGTAAGacttcttcctcaagttccgagGGTGAAATTGTTTTTCCATTTTCCCTCTCAGAAATCGCTATGCTTCTCTGACCTCTTCACCGGATTATCAGGCTCCACCGTTGACTTCACCTATAACTCTTCTTCTCAAATCTATGACACTGTCGTTTCAAAGTGTCAGAATCTTCAAGGTTTATCTTTACTCAAAGTTGGTGGAAGAATGGTTTATTCAACATGCTCAATGAATCCTATTGAGAATGAAGATGTGGTTGCAGAGTACATCGGTTTGTTCCATTTCCGCCTATGTGGCACCATGGTGAATTTTGTGCCAGCCGCCATAGAAGCTAGCGCTAGATATGATATTGCGTCGGCTAGTGGCACCGCCAATTCTTCTGCCTTGACAATGATGCATCTGAAACAATTATTTTTTGTCATCTCTTTGAGCTACAAACATTGTTGCCAAGCAAAAAATTGCTTAGAATTAGCAACTGATATGAAAGAGCTTATAAAAGCTGCTTTTAATGCAACAGCAGAGGAGTTAATAAAACAAATACATAACTCAACACTTTATGATGAACTTGCAAAAGACAACATGACAAAACAAGCAATGGATATTTGTAATGAGGTTTTGGATTATGCTGTTGATGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTGGATGGTTTTGAGAATACAACAACTAAAGCTGGTGAAATTATGGCTAAAGCTTTGAACACTTCTTTGGAATTAAGTAGTAATTCTTTGGACATTATTAATGCTGTTTCTAGCTTACTTAAGGATGTTGGTGACAATAATGTTAATGTAAATCTTAATAGGAGGCTTTTGTCTAATGATGGTTTTCCTTCTTGGGTTAGTGAAGGGCAAAGACATCTTTTGATGGAAGGAAATTTTAAGCCAAATGATGTTGTGGCTCAAGATGGTAGTGGACAATTTAAGACATTAAGTGAAGCTCTTTTGACAGTTCCTTTTTATATTGCACAACCTTTTGTGATTTATGTTAAGGCTGGTATTTATAATGAGAATGTTAATGTGCTTAAGGAAATCACTCATGTTACTATCATTGGTGATGGTCCTACAAAGACTAGATTCACTGCTAGCCTTAACTATGTTGATGGTGTCCAAACTTACAACACTGCAACTTTTGGTGTAAATGGTGCAAACTTCATGGCAAAGGATGTTGGATTTGAGAACACAGCAGGAGCATAG 1269 0.3593 MNYATNHLYSQDLDIDVRLLPQVPRVKLFFHFPSQKSLCFSDLFTGLSGSTVDFTYNSSSQIYDTVVSKCQNLQGLSLLKVGGRMVYSTCSMNPIENEDVVAEYIGLFHFRLCGTMVNFVPAAIEASARYDIASASGTANSSALTMMHLKQLFFVISLSYKHCCQAKNCLELATDMKELIKAAFNATAEELIKQIHNSTLYDELAKDNMTKQAMDICNEVLDYAVDVWLTGTLSHQQTCLDGFENTTTKAGEIMAKALNTSLELSSNSLDIINAVSSLLKDVGDNNVNVNLNRRLLSNDGFPSWVSEGQRHLLMEGNFKPNDVVAQDGSGQFKTLSEALLTVPFYIAQPFVIYVKAGIYNENVNVLKEITHVTIIGDGPTKTRFTASLNYVDGVQTYNTATFGVNGANFMAKDVGFENTAGA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00595 422 Gene3D Vaccinia Virus protein VP39 67 129 IPR029063 -
Car03g00595 422 Gene3D Invertase/pectin methylesterase inhibitor family protein 159 276 IPR035513 -
Car03g00595 422 CDD PMEI-like_3 174 277 - -
Car03g00595 422 Pfam Plant invertase/pectin methylesterase inhibitor 175 271 IPR006501 GO:0004857
Car03g00595 422 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 171 275 IPR035513 -
Car03g00595 422 PANTHER PECTINESTERASE 226 422 - -
Car03g00595 422 SUPERFAMILY Pectin lyase-like 320 421 IPR011050 -
Car03g00595 422 PANTHER PECTINESTERASE 226 422 - -
Car03g00595 422 PANTHER PECTINESTERASE 155 226 - -
Car03g00595 422 Pfam Pectinesterase 323 422 IPR000070 GO:0030599|GO:0042545
Car03g00595 422 Gene3D - 315 422 IPR012334 -
Car03g00595 422 PANTHER PECTINESTERASE 155 226 - -
Car03g00595 422 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 116 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00595 Car-Chr3 28930964 28934943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00595 174 422 Carbohydrate Esterase AT3G05610 43.165 1.14e-65 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00595 K01051 - gmx:100784682 334.339