Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00594 ATGGATCCCAAGAGCTcaaaacaacaatcacaagaaccaaacaacaacaTGGGAGAGAACAAACCCTCTGATTCAAAAGACTTCCAAATAGTATTATCTGAaacaacaacaaaagatgaaacaacaaaaaaacaacaacaactagcaccaaaaagaacatcaaacaaagacagacacacaaAAGTTGAAGGAAGAGGAAGAAGAATAAGGATGCCAGCTTTATGTGCAGCTAGAATCTTCCAACTAACAAGAGAATTAGGTCACAAATCAGATGGTGAAACAATCCAATGGCTTCTTCAACAATCTGAACCATCCATCATAGCAGCCACAGGAACAGGAACAATACCAGCTTCAGCTTTATCTTCTTCTTCTGTTACAACACAACAACAAGGTAGTTCTTCTTGTTCTTTGTCTTCTGGTTTGCAATTACATCAAAAAATTGATGAATTAGTTGGAAACAGAATAACCAGTTCAAATAGTTGGGGTACTATGGTTGGTGGAAACTTAGGAAGAACAAATATGTGGACCCCACATCATCATGTTAGTGGATTTGGATTTCAATCATCATCTGCTCATTCTACTACTACTAATGATCATGGTTCAAATTATCTTTCAAAAATTGGGTTTTCTGGATTTGatcatcaaaatattaatagtaataataataataataatGGAAATATGGTTGGTGGAATGAGTTTTACATCAATTTTGGGTGGAAATCATCAGCAGATTCCTGGATTGGAATTAGGGTTGTCACAAGATGGACAGCATATTGGGGTTTTGAATCAACAAGCTTTGAGTCAGATTTATCAGCAGATTGGTCAAACTAGGGTTcatcatcaacagcagcagaatcagaatcagaatTCTAGTAAGGATGATTCTCAAGGTTCAGGGCAGTGA 906 0.3035 MDPKSSKQQSQEPNNNMGENKPSDSKDFQIVLSETTTKDETTKKQQQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALSSSSVTTQQQGSSSCSLSSGLQLHQKIDELVGNRITSSNSWGTMVGGNLGRTNMWTPHHHVSGFGFQSSSAHSTTTNDHGSNYLSKIGFSGFDHQNINSNNNNNNGNMVGGMSFTSILGGNHQQIPGLELGLSQDGQHIGVLNQQALSQIYQQIGQTRVHHQQQQNQNQNSSKDDSQGSGQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00594 301 MobiDBLite consensus disorder prediction 1 36 - -
Car03g00594 301 MobiDBLite consensus disorder prediction 1 68 - -
Car03g00594 301 ProSiteProfiles TCP domain profile. 55 109 IPR017887 -
Car03g00594 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 300 IPR005333 GO:0003700
Car03g00594 301 MobiDBLite consensus disorder prediction 37 68 - -
Car03g00594 301 Pfam TCP family transcription factor 53 173 IPR017887 -
Car03g00594 301 MobiDBLite consensus disorder prediction 277 301 - -
Car03g00594 301 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00594 Car-Chr3 28916524 28918247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00594 21 301 TCP Transcription Factor Family AT3G27010 52.667 1.10e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car03g00594 TCP 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00594 - - vvi:100253170 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00594 03 28916524 28918247 Car03g00594 03 28916524 28918247 ECH