Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00588 ATGGAGAGTTATTCCATGTTGTTTCCTTGTCCTCCTTCTTCTAGCCACCAAATTCCAACTATTGGTAGTTTTATTAATGGTCAATCCTCAAATGCATTTCTTGATTTGAATCCTACTAAAAGTGAAAATATTAATCACGAAGATGATGAGAAGAGAGGAGAACGGATTGTTAATGTTATTGATCAACTAGGTGTTAGAAAGAAAGGTGAGAAAAAGGCTAAGAAGCCTAAATATGCTTTTCAAACAAGGAGTCAAGTTGATATACTTGATGATGGTTATCGATGGAGAAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTATCGATGCACACATCAAGGGTGCAATGTAAAGAAACAAGTCCAACGCTTAACAAAAGACGAGGGAGTAGTGGTGACTACTTATGAAGGAGTGCATACTCACCCTATTGAGAAAACAACCGATAACTTTGAGCATATTCTGAGTCAAATGCAAATATATACCCCCTTTTAA 507 0.3609 MESYSMLFPCPPSSSHQIPTIGSFINGQSSNAFLDLNPTKSENINHEDDEKRGERIVNVIDQLGVRKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00588 168 SUPERFAMILY WRKY DNA-binding domain 81 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g00588 168 Gene3D WRKY domain 73 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g00588 168 ProSiteProfiles WRKY domain profile. 84 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00588 168 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 38 164 - -
Car03g00588 168 SMART WRKY_cls 89 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00588 168 Pfam WRKY DNA -binding domain 90 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g00588 168 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 164 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00588 Car-Chr3 27966398 27969123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00588 77 168 WRKY Transcription Factor Family AT5G13080 86.957 2.76e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g00588 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00588 - - ccaj:109792402 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00588 03 27966398 27969123 Car03g00588 03 27966398 27969123 ECH