Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00579 ATGAGAAAAAGGGCATTCACCGCAGAAGAAGAAAACTCAATTGTTGAGCTCCACTATATAACGGGAAATAAATGGTCTCAAATCGCTCAAAAGTTGTTTGGTCATACAAACAATGAGATAAAGAACAATTGGCGCATAAGGAGTAAGAGATTGGAAAAAGCTGGCTTATCAATCTATCCTGAAGAAGTAGAGCAAAGGGAAAACAATACAAATCAAGAACATATCGAGATAATAGCCAACCAACACTATGGTGATGATTCACAAACAATAAACTTAGATATACTTGATGTGGGATATGATAATTATTCTCCTCCATGTGATCCATGCATTAGTAGTCAGTTTCATGGATATAATAACCTTACTATAGATAGTCATAACACATTAAATGAAAATATATCTTCTTTTGAACCCATATATGATGGGTCAACTACATATGAACTCCCTTCATTCCAATGTATACATACTCGACAATGTAATTTGAACACACTTGCGTCCCGACTTCCTCCACACCAGTCTGTCGACACTCTGATTCAAATACCTCCAATTGAAGAACCTAATAATTCAATTATGGTTTATCCGGATAAAGGTGGTTTCCTCAATACAAGATCATTCCACAATGGCTCAAATGTCCAAGAGGGAATAGAACAAATGACCCATGATGAAGCATTGAAAGACTCAAATGTACAAGAGGGAATAGAACAAACGACGCATGATGAAGCATTCAAGATTTCAACTTACACTAACATTTGTGCAAAATGGGATAAATTAGATGGACTGAGGTACAACCTATTAGACGAGTCTTTTGCAACATTCCGGTGA 819 0.3626 MRKRAFTAEEENSIVELHYITGNKWSQIAQKLFGHTNNEIKNNWRIRSKRLEKAGLSIYPEEVEQRENNTNQEHIEIIANQHYGDDSQTINLDILDVGYDNYSPPCDPCISSQFHGYNNLTIDSHNTLNENISSFEPIYDGSTTYELPSFQCIHTRQCNLNTLASRLPPHQSVDTLIQIPPIEEPNNSIMVYPDKGGFLNTRSFHNGSNVQEGIEQMTHDEALKDSNVQEGIEQTTHDEAFKISTYTNICAKWDKLDGLRYNLLDESFATFR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00579 272 Gene3D - 5 78 - -
Car03g00579 272 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 102 - -
Car03g00579 272 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 2 102 - -
Car03g00579 272 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Car03g00579 272 SUPERFAMILY Homeodomain-like 3 52 IPR009057 -
Car03g00579 272 CDD SANT 5 45 IPR001005 -
Car03g00579 272 ProSiteProfiles Myb-like domain profile. 1 45 IPR001005 -
Car03g00579 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 52 IPR017930 -
Car03g00579 272 SMART sant 2 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00579 Car-Chr3 27376149 27377479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00579 1 87 MYB Transcription Factor Family AT2G26950 43.333 1.56e-18 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car03g00579 Myb_DNA-binding 2.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00579 K09422 - cam:105853111 372.089