Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00575 ATGGCAAATGATTCAGAGGAAACAAAGTTGATGACTAGAAACAACTGGTCTGCTATAGTATATAGGCGAGCTGTTACGAATGATGGTGAATTTATTGCTGTCAAGAAGCTGAATTCGCGCGGAGGAGCATCGAGCATCGACCGAAGCATCTTAGCTGAGATTTCAACTCTTGGAAAGACCAGGCACATGAACATTGTGAAGTTGCATGAATTCTGTTTTCATGAAGATTCTAATCTTTTATCATAG 246 0.4024 MANDSEETKLMTRNNWSAIVYRRAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLLS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00575 81 Gene3D Phosphorylase Kinase; domain 1 3 81 - -
Car03g00575 81 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 18 80 - -
Car03g00575 81 SUPERFAMILY Protein kinase-like (PK-like) 18 77 IPR011009 -
Car03g00575 81 PANTHER RECEPTOR-LIKE PROTEIN 55 18 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00575 Car-Chr3 26975743 26976448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00575 17 80 Receptor kinase-like Gene Family AT5G65700 43.750 1.43e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car03g00575 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00575 - - lja:Lj3g3v0999850.1 93.9745