Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00568 ATGGGGATNNNNNNNNNNNNNNNNNTTTCCCTACCAGGAGATGGATTTGACACTGTGATTAAAGCAAAGGAAGCTGTGGAAGCTGCATGCCCAAATGTTGTCTCATGTGCAGACATTTTGGCACTTGCTACTAGAGACGTTATAGCCTTGCTTGGAGGCCCTTCATTCAGCGTTCAACTAGGACGACGAGACGGGCTTATTTCAAAAGCATCAACAGTAGAAGAAAATCTTCCAAAAGCAAGTTTCAATCTAAATCAACTAAACAACATTTTCTCCAAACACAACCTAACCCAAACCGACATGATTGCACTCTCAGGAGCACACACCATAGGATTCTCACATTGTGACCAATTCACAAACCGTTTATATTCATCTCAAGTGGACCCCACATTAGACCCAACCTATGCTCAAGAATTAATTTCAGGGTGTCCAAAAAATGTTGACCCATCTATAGTGCTTCCTCTTGATCCACAAACACAATTTGTTTTTGATAATTTTTATTACAAAAATTTGGTTTCTGGAAAAGGGTTGTTGAGTTCGGATCAAGTTTTGTTTAGTGATGATGCTTCAAGATCAACGGTTGTTGAGTTTGCTAATGATGGTGGTAAATTTTTTGAGGCATTTGTTGTGGCTATAAAGAAGCTTGGAAGGGTTGGGGTTAAGACTGGTCAAGAGGGAGAAATTAGGAGAGATTGCAGTAAATTTAATTAA 711 0.3854 MGXXXXXXXSLPGDGFDTVIKAKEAVEAACPNVVSCADILALATRDVIALLGGPSFSVQLGRRDGLISKASTVEENLPKASFNLNQLNNIFSKHNLTQTDMIALSGAHTIGFSHCDQFTNRLYSSQVDPTLDPTYAQELISGCPKNVDPSIVLPLDPQTQFVFDNFYYKNLVSGKGLLSSDQVLFSDDASRSTVVEFANDGGKFFEAFVVAIKKLGRVGVKTGQEGEIRRDCSKFN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00568 236 Gene3D - 14 236 - -
Car03g00568 236 PANTHER PEROXIDASE 55 9 236 - -
Car03g00568 236 ProSitePatterns Peroxidases proximal heme-ligand signature. 100 110 IPR019793 -
Car03g00568 236 PRINTS Haem peroxidase superfamily signature 156 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Haem peroxidase superfamily signature 100 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Haem peroxidase superfamily signature 34 51 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Haem peroxidase superfamily signature 52 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 SUPERFAMILY Heme-dependent peroxidases 14 236 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 CDD secretory_peroxidase 10 235 IPR033905 GO:0004601|GO:0042744
Car03g00568 236 PRINTS Plant peroxidase signature 33 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Plant peroxidase signature 99 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Plant peroxidase signature 210 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Plant peroxidase signature 52 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Plant peroxidase signature 14 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PRINTS Plant peroxidase signature 170 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 ProSiteProfiles Plant heme peroxidase family profile. 1 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 Pfam Peroxidase 14 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 PANTHER - 9 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00568 236 Gene3D Peroxidase, domain 2 78 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00568 Car-Chr3 26638076 26644154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00568 10 236 Peroxidase AT4G30170 58.369 1.88e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00568 K00430 - gmx:100791275 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00568 03 26638076 26644154 Car03g00568 03 26638076 26644154 ECH