Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00567 ATGATGGATGTGGAGAAGCAGAATCTGAATTCAGAGTTTCCGTTCTGGAAACCCATTTCTCGTAGGTTCCAACCCGATTCACTTTTCTTTGCTCCCGGCAACGTCGAACGTGAACTTCTTGTCAAACAGGTTGCCTTGGAATTAACAGAAGAGAAAGAACAGCTTGAGAATTTGATACAAGAGGATGGAAGGGAAGTCTTCTGTCCCATTGTTGGGTGTGGAGTGTGTTTGCCTTCAATGGAGGACTTTGAAAATCACTATAATGCAAGACATACTGCGTCCTGTTCTGTGTGTTCTAGAGTCTACCCAACGTCGCGGTTGCTAAGCATACATGTATCCGAAGCTCATGATTCTTTCTTTCAAGCAAAAGTTGCACGCGGCTATGACATGTATGAATGCTTAGTGGAAGGTTGTGGATTGAAATTCAAAAGCTACAAAAGCCGGCAGCAGCATCTGGTTGACAAGCATAAATTCCCGACATCATTCGAGTTTTACAAGAAGGCTCTGCCTTCAAAGAAACATAGGCTGAAGTCTCAGCGCAAACAATCTACTCATAAGGAAGATACTTCAGGAATGATGGAAGTGGAAAATGCAGCCATAGATGACCTTGTTTCAGCAGTCTCTAGATTGAATACTTCGGACTCCACTCCTTCATCTATCAGCTTTGGTCGCCGCCACACCAAAGGCTTGTCATTTGTCCCTCGAGTGGTTCAACGTGGGAGGGGATCAAACTCGGGTTCATCCATTCCAAAGAGATAA 759 0.444 MMDVEKQNLNSEFPFWKPISRRFQPDSLFFAPGNVERELLVKQVALELTEEKEQLENLIQEDGREVFCPIVGCGVCLPSMEDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFPTSFEFYKKALPSKKHRLKSQRKQSTHKEDTSGMMEVENAAIDDLVSAVSRLNTSDSTPSSISFGRRHTKGLSFVPRVVQRGRGSNSGSSIPKR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00567 252 MobiDBLite consensus disorder prediction 173 192 - -
Car03g00567 252 PANTHER UNCHARACTERIZED 9 239 IPR039258 -
Car03g00567 252 Coils Coil 41 65 - -
Car03g00567 252 ProSitePatterns Zinc finger C2H2 type domain signature. 133 156 IPR013087 -
Car03g00567 252 ProSitePatterns Zinc finger C2H2 type domain signature. 95 116 IPR013087 -
Car03g00567 252 PANTHER ZINC FINGER PROTEIN 511 9 239 - -
Car03g00567 252 SMART c2h2final6 93 116 IPR013087 -
Car03g00567 252 SMART c2h2final6 131 156 IPR013087 -
Car03g00567 252 SMART c2h2final6 66 91 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00567 13 248 C2H2 Transcription Factor Family AT5G14140 64.490 2.13e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car03g00567 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00567 - - gmx:100819557 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00567 03 26535593 26538657 Car03g00567 03 26535593 26538657 ECH