Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00563 ATGTTGAGCTTCCATATTCATTTTACTCAAGGAAGTGAACTGGTCCCTACCGAAACAAGCAGTTCAAAAATATACATTATTCATGTGAATGAGCCAGAGGGTAAGATGTTTTCTCAATCAGAAGATTTAGAAAGTTGGCATCATTCATTCATGCCACCTACTGTTATGACCTCTAAGGAACAACAACCACGAATGATTTATTCATATAGAAATGTGCTGAGTGGTTTTGCTGCAAGACTGACTCAAGAAGAGCTGAGAGCTGTGCAGCAGAAAAATGGCTTCATTTCAGCTCATCCCGAAAGGATGCTACGTCGTCAAACAACACATACACCAGATTTCTTGGGGTTGCAGCAAGATATTGGATTATGGAAGGACTCAAATTTTGGAAAGGGAGTAATTATTGGTGTTCTGGATTCAGGAATCACACCTGATCATCCTTCATTCAGTGATGCAGGAATACTACCGCCACCGCTCAAATGGAAAGGGAGATGTGAACTTAATGGTACAGCATGTAACAACAAACTAATTGGAGCAAGGTCCTTTAACAATGCAGCTAAGGCAAGGAAAGGAGAGAAGGGTGAGGCGCCGATTGATGAGGATGGACACGGGACTCACACAGCAAGTACAGCGGCTGGTGCTTTTGTGGACAAAGCACAAGTACTGGGAAATGCCAAAGGTACAGCAGCAGGGATGGCTCCTCATGCTCACCTAGCAATTTACAAAGTGTGCTTTGGAGAAGACTGTCCGGAGAGTGATATACTAGCGGCATTAGACGCAGCTGTGGAGGATGGTGTGGATGTAATATCGATATCGCTTGGTCTAAGCCAGCCGCCTCCATTTTTTAATGACAGCACTGCTATAGGGGCTTTTGCAGCAATTCAAAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAATTTTGGCCCTTTTGATGGTTCACTGGTTAATGGAGCTCCATGGATTCTCACTGTTGGAGCAAGTACTATTGACAGAAGCATTGTTGCAACAGCAAGGCTTGGAAATGCGGAAGAATTTAATGGTGAGTCTGTTTTCCAGCCTTCCAATTTTTCTCCAACATTGTTGCCCTTGGCATATGCAGGAAAGAATGGAAAACAAGCATCGACATTTTGTGCTAATGGATCATTGAGTGACATTGATTTCAGAGGCAAGCCTGCAAATCTCCTTGCGACCGGTTCGGGCCACGTGAATCCATCAAGAGCAAATGATCCTGGATTAGTATATGATATCCAACCTGATGATTATATACCTTATCTCTGTGGTTTAGGCTACAGTGATGTGGAAGTTGGGATCATTGCACACAAGACCATTAAATGCTGTGAGACTTTAAGCATTGCTGAAGGAGAGCTTAACTACCCTTCATTCTCTGTTGTGCTTGGTTCTTCACATATATTCACAAGGACAGTGACAAATGTAGGTGAGGCCCACTCAACTTATGGTGTCACAGTTTCGGCACCAAAAGGGATTGATGTGAAGGTCCAGCCAAAAAAACTTATCTTTTCAAAAGCCAACCAGAAAGAAACATATTCAGTGACGTTCAACCGTATAGGGTTGGGTAATAAGACAGAAGAATATGCTCAAGGATTTCTAAAATGGGCATCTGCTAAACACTCTGTCAGGAGCCCTATCTTGGTCAAATTTGCATAG 1662 0.4302 MLSFHIHFTQGSELVPTETSSSKIYIIHVNEPEGKMFSQSEDLESWHHSFMPPTVMTSKEQQPRMIYSYRNVLSGFAARLTQEELRAVQQKNGFISAHPERMLRRQTTHTPDFLGLQQDIGLWKDSNFGKGVIIGVLDSGITPDHPSFSDAGILPPPLKWKGRCELNGTACNNKLIGARSFNNAAKARKGEKGEAPIDEDGHGTHTASTAAGAFVDKAQVLGNAKGTAAGMAPHAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLSQPPPFFNDSTAIGAFAAIQKGIFVSCAAGNFGPFDGSLVNGAPWILTVGASTIDRSIVATARLGNAEEFNGESVFQPSNFSPTLLPLAYAGKNGKQASTFCANGSLSDIDFRGKPANLLATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDVEVGIIAHKTIKCCETLSIAEGELNYPSFSVVLGSSHIFTRTVTNVGEAHSTYGVTVSAPKGIDVKVQPKKLIFSKANQKETYSVTFNRIGLGNKTEEYAQGFLKWASAKHSVRSPILVKFA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00563 553 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 389 IPR045051 -
Car03g00563 553 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 20 389 - -
Car03g00563 553 Gene3D - 329 386 - -
Car03g00563 553 Pfam Subtilase family 129 382 IPR000209 GO:0006508|GO:0008236
Car03g00563 553 Pfam Peptidase inhibitor I9 25 104 IPR010259 -
Car03g00563 553 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 134 145 IPR023827 -
Car03g00563 553 SUPERFAMILY Subtilisin-like 106 367 IPR036852 GO:0004252|GO:0006508
Car03g00563 553 MobiDBLite consensus disorder prediction 187 206 - -
Car03g00563 553 Gene3D - 424 552 - -
Car03g00563 553 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 390 550 - -
Car03g00563 553 MobiDBLite consensus disorder prediction 187 201 - -
Car03g00563 553 CDD Peptidases_S8_3 106 328 IPR034197 -
Car03g00563 553 ProSiteProfiles Serine proteases, subtilase domain profile. 113 553 - -
Car03g00563 553 Gene3D Peptidase S8/S53 domain 387 420 IPR036852 GO:0004252|GO:0006508
Car03g00563 553 Gene3D Peptidase S8/S53 domain 131 328 IPR036852 GO:0004252|GO:0006508
Car03g00563 553 Pfam Fibronectin type-III domain 454 550 IPR041469 -
Car03g00563 553 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Car03g00563 553 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Car03g00563 553 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 390 550 IPR045051 -
Car03g00563 553 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 10 105 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00563 Car-Chr3 26445820 26448022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00563 388 552 Subtilisin-like Serine Gene Family AT3G14067 37.143 2.82e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00563 - - gmx:100785376 637.876