Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00557 ATGAGGCTGCCTTCTAAATGCTTCCAGAACATCTTGATCAGACCAACCCCATTTCTTAAAGcatcccaaagcccttctcgttcgagctgcctcgctggctcctccgcatcccaaagcCCTTCTTCCCTTCTTCTTGTCCGAACCCTCTGCATCCCTGTTTCGCTCCGCCGTGATGATCGCTATCTCTTAAGACAATCTTTTGCTTACAGCAAATCAGGAGTCTGTAAAACTTGCAGATTTCGGTCTTGCAAGAGAAGATCAGTGACTGAGATGATGCCTGCCGCAACAGGAACTTACCGATGGATGGCACCAGAGTTGTACAGTACCGTAACATTGCGCCAGGGAGAGAAAAAGCACTATAACAACAAGGTTGATGTGTATAGCTTTGGGATTGTTTTGTGGGAGCTACTAACAAATCGCATGCCTTTTGAAGGAATGTCTAATTTACAAGCTGCTTATGCTGCTGCCTTCAAGCAAGAGAGGCCGAGAATTCCAGATGACATATCCCCCGATCTTGCTTTCGTCATACAATCATGCTGGGTTGAAGATCCTAACTTGAGACCAAGCTTTAGTCAAATCATCCGGATGCTCAATGCATTTCTCTTCACACTCTCGCCACAATCTCTTCCTCCCTTGCCAGAACCCGACAATGAACCTGAGGCGGCAACAAGTAGTAATGGCTGGTTTGACACTCTTGAAAAGCCTAATGTTAATTACCAGAAATGGGTTGCCAAAAAAGAATCCAGCTTGGGAGATTTCCTCAaaAAGTATgcaaaagcgacagaacacgaggcacgagaggcgcgggaggagctaaggaaagcagaacaacgtcgacaagaggatgagcaacgcactaaagagctccagatacagctagcaacagtggcaaaaagtgttgcttccatacaggatgagtcatcccctcgtcgtcgtcatccagattatgacgaggatgagtctaacgatgatgacaacgatgagtag 987 0.3242 MRLPSKCFQNILIRPTPFLKASQSPSRSSCLAGSSASQSPSSLLLVRTLCIPVSLRRDDRYLLRQSFAYSKSGVCKTCRFRSCKRRSVTEMMPAATGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPRIPDDISPDLAFVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPQSLPPLPEPDNEPEAATSSNGWFDTLEKPNVNYQKWVAKKESSLGDFLKKYAKATEHEAREAREELRKAEQRRQEDEQRTKELQIQLATVAKSVASIQDESSPRRRHPDYDEDESNDDDNDE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00557 328 MobiDBLite consensus disorder prediction 264 288 - -
Car03g00557 328 MobiDBLite consensus disorder prediction 289 304 - -
Car03g00557 328 MobiDBLite consensus disorder prediction 210 230 - -
Car03g00557 328 Coils Coil 258 292 - -
Car03g00557 328 PANTHER SERINE-THREONINE PROTEIN KINASE 72 230 - -
Car03g00557 328 MobiDBLite consensus disorder prediction 264 328 - -
Car03g00557 328 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00557 328 SUPERFAMILY Protein kinase-like (PK-like) 70 213 IPR011009 -
Car03g00557 328 Pfam Protein tyrosine and serine/threonine kinase 82 197 IPR001245 GO:0004672|GO:0006468
Car03g00557 328 Gene3D Transferase(Phosphotransferase) domain 1 9 210 - -
Car03g00557 328 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 72 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00557 Car-Chr3 25704899 25708726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00557 75 200 MAP Kinase Kinase Kinase AT5G01850 82.540 8.29e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car03g00557 PK_Tyr_Ser-Thr 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00557 - - cam:101511109 305.834