Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00548 ATGGGACGATACATAGAAGAAATTACTTTTGTCACCATGAAAGATTTCCGGATAAAAAAAAATCATGATCCATCTAAAGAACAACAAAATAGACATTCTTCAAGGTGCGGATGCAAGACGAACATGACAATCAAATTGCAAAAAGCCTTTGATATTTTTCCAAAAGAATGGCAGGTTATTGAACTTATATCCAATCATAATCATGATTTACTACCTCGAGATCAAGTGTGCTTCCATGCATTTTACCGCAACATTTCTAAAGAAGACGGAAAGAGAATTTTGTTATTAAAAGAAATTGATATTTCAGTCCAGCAAATAATATGTGTTATGGAGCTTGAGAAAAATGTAAAGCATGGAGATCTTCCATTTCTTCAGAAAGATATTCATAATTTCTTCAATAAGATTCACCAATATAAGTTGGATGGTGATGCTAATGATCTTTTACAATTTTGCAAGTGTGCGAATATGAAAACTTTTGCTTCCATTTTGCATTTATTGTGA 501 0.3194 MGRYIEEITFVTMKDFRIKKNHDPSKEQQNRHSSRCGCKTNMTIKLQKAFDIFPKEWQVIELISNHNHDLLPRDQVCFHAFYRNISKEDGKRILLLKEIDISVQQIICVMELEKNVKHGDLPFLQKDIHNFFNKIHQYKLDGDANDLLQFCKCANMKTFASILHLL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00548 166 Pfam FAR1 DNA-binding domain 10 72 IPR004330 -
Car03g00548 166 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 157 IPR031052 GO:0006355
Car03g00548 166 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 23 157 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car03g00548 FAR1 8.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00548 - - mtr:MTR_6g014355 179.489