Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00540 ATGCATGTTCTGAGCAAACATATAAAAGGTCATAAAACTGTTTGCAAGGAGTTAGGAATCGGAAAAGCTGAATTATGCCAAATCATAAAGGATGATCCACTAGAGTTTATTAGATTGGCTTCAAAACCGGAACAGAAGGGGACTAGAAGGGACTACTATGATGACCCGCGTTGTTATTTGGAGAAAACAACTTTCTTGTTGAAATTGGGGTATCTTGAGAACTCTGAGGAGATGGAAGAAGCGGTGAAGGTGTTTAAAGGGAGAGGTGATCAGTTACAAGAGAGATTCGATTGCCTGGTAGAAGCTGGTTTGGATTATAACAGAGTGGTTGAAATGATAAAGCGAGTTCCTGTGATTCTAAATCTGAAGAGAACTTTAATTCAAAAGAAGATTGATTTCTTAATAAATGTTTTAGGTTACCCAATAGAATGTCTTTTGGGATACCCGACATACTTTTGCCATGATTTGGACAAAATTACTGCAAGATTTTCAATGTATGAGTGGTTGAAGACGAGGAATGCAATAAATCCTGAGTTAAACTTGAGTAGCATAGTTTCATCTAATGAAAAACGGTTTGTAAAATACTTTGTGAATGTGCATCCTGAAGGTCCAGCCATTTGGCAAAGTATAACAAGTTTATCAAATAAAGATAAGAAATAA 660 0.3621 MHVLSKHIKGHKTVCKELGIGKAELCQIIKDDPLEFIRLASKPEQKGTRRDYYDDPRCYLEKTTFLLKLGYLENSEEMEEAVKVFKGRGDQLQERFDCLVEAGLDYNRVVEMIKRVPVILNLKRTLIQKKIDFLINVLGYPIECLLGYPTYFCHDLDKITARFSMYEWLKTRNAINPELNLSSIVSSNEKRFVKYFVNVHPEGPAIWQSITSLSNKDKK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00540 219 Pfam mTERF 84 192 IPR003690 GO:0003690|GO:0006355
Car03g00540 219 Gene3D Transcription termination factor 3, mitochondrial 2 208 IPR038538 -
Car03g00540 219 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 3 211 - -
Car03g00540 219 PANTHER CGI-12 PROTEIN-RELATED 3 211 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00540 Car-Chr3 24195479 24196138 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car03g00540 mTERF 2.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00540 - - cam:105851478 448.743