Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00527 ATGGAGTTGCAGGGTGGGAATAATAGTGGTAGAATAATAATCGACCCAAGAAGTGGTTTTTGCAGTTCCAATTCAATTTTCTACAGCAAGAGAAAACCCCACTCACTCCCTCCAAATCACTCCTTAGACGTCACAACTTTCATCTCCTCCTGCTCCCATCACGGCCGCATTGCCTTCATCGATGCCTCCACCGGCCGACACATCACCTACCAACAACTCTGGCGTTCCGTCGAAGCCGTCACTTGCTCTCTCTCCAACACGGGAATCCGAAAGGGTGACGTCATCCTCATCCTCTCTCCCAATTCAATCTATTTCGCGGTGGTGTGTCTCTCCGTCTTGTCCCTCGGCGCAATCATCACCACCACCAATCCTCTCAACACAATACACGAAATCACCAAGCAGATCGCCGATTCTAAACCCGTCCTTGCCTTCACAACTACTCCCCTCGCTCCAAAAATCACAGGAGCATCACCTACCCTTCCAATCATTCTCATGGAATCCGAAGATAACTCATCAAACACAGTGGAGAAAATGATGAAGAAAGAACCAGAGTTAAGTAAAGTGAGGGAACGAGTGAACCAAGACGATATAGCTACTTTGCTTTACTCTTCTGGAACAACGGGAGCCAGCAAAGGTGTGATATCTTCTCATAAGAATCTCATAGGAATGGTTCAAAACAAAATGGCAATGTTCGGTAAAGAACAAGAAAAACGTGGACAAACGTTTATATGCACTGTTCCAATGTTTCATATATACGGTCTTGCAGTGTTCGCTACGGGGCTTCTCGCTTTGGGTTCAACCATTGTTGTTATCTCGAAATTCGAGATGCATGATATGCTTTCATCGATTGAGAAATTCAGAGCATCGTTTCTACCAGTCGTGCCTCCCATATTGGTGGCTATGCTTAACAACGCCGATGCGATTAAGAGTAAGTATGACTTGAGTTCCCTTCATTCGATGTTCTCAGGCGGGGCTCCTCTAAGCAAAGAGGTTATAGAAGGGTTTATTGAAAAGTTCCCAAATGTTACGATACTTCAGGGTTATGGTCTAACAGAAACCTCTGGAGTTGGGGCTTCCACTAACTGTTTTGAAGAGAGTCGTAAGTATGGCACAGCGGGGCTTTTGTCTTCTTCAACGGAGGCTATGATTGTCGACATTGACACTGCTCAACCACTGGCTATTAATCAGACAGGTGAACTTTGGCTCCGGGGTCCCACTATCATGAAAGGTTATTTAAGTAACGAGGAGGCAACTAAATCAACCCTTACTTCAGAGGGTTGGTTAAAAACAGGGGATATTTGCTATATTGATAGCGATGGATACTTATTTGTGGTTGATCGCTTGAAAGAGCTAATTAAATATAAGGGATATCAGGTTCCTCCAGCAGAACTTGAGGCTCTGTTGCTGACTCATCATGCTATTCTAGATGCTGCTGTTATACCATATCCAAATAAAGAGGCGGGCCAGATTCCAATGGCATATGTAGTGAGGAAGGCTGGAAGTAATATATCAGAAAAACAAGTTATGGATTTTGTTGCAGGACAGGTTGCTCCATACAAAAGAATTCGCAAAGTGACCTTTATATCTTCCATACCTAAAAATCCATCTGGTAAAATTCTTCGGAAGGATCTCATCAAACTCGCTACAGCTAAACTCTAA 1659 0.44 MELQGGNNSGRIIIDPRSGFCSSNSIFYSKRKPHSLPPNHSLDVTTFISSCSHHGRIAFIDASTGRHITYQQLWRSVEAVTCSLSNTGIRKGDVILILSPNSIYFAVVCLSVLSLGAIITTTNPLNTIHEITKQIADSKPVLAFTTTPLAPKITGASPTLPIILMESEDNSSNTVEKMMKKEPELSKVRERVNQDDIATLLYSSGTTGASKGVISSHKNLIGMVQNKMAMFGKEQEKRGQTFICTVPMFHIYGLAVFATGLLALGSTIVVISKFEMHDMLSSIEKFRASFLPVVPPILVAMLNNADAIKSKYDLSSLHSMFSGGAPLSKEVIEGFIEKFPNVTILQGYGLTETSGVGASTNCFEESRKYGTAGLLSSSTEAMIVDIDTAQPLAINQTGELWLRGPTIMKGYLSNEEATKSTLTSEGWLKTGDICYIDSDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHHAILDAAVIPYPNKEAGQIPMAYVVRKAGSNISEKQVMDFVAGQVAPYKRIRKVTFISSIPKNPSGKILRKDLIKLATAKL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00527 552 Pfam AMP-binding enzyme 53 454 IPR000873 -
Car03g00527 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 551 - -
Car03g00527 552 Gene3D - 24 449 IPR042099 -
Car03g00527 552 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Car03g00527 552 SUPERFAMILY Acetyl-CoA synthetase-like 53 548 - -
Car03g00527 552 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Car03g00527 552 CDD 4CL 36 544 - -
Car03g00527 552 PANTHER BNAA06G14440D PROTEIN 12 551 - -
Car03g00527 552 Gene3D - 450 551 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00527 Car-Chr3 23048763 23051783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00527 12 552 Monolignol Biosynthesis Gene Families AT1G20500 64.364 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00527 K10526 - gmx:100811344 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00527 03 23048763 23051783 Car03g00527 03 23048763 23051783 ECH