Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00525 ATGCTTATCATGGTTGTTATTTTAGTTAACATGAAAGACATTGTGATGGTCCCTCCAGCAGAACTTGAGGCTCTGTTGCTGACTCATCCTTCTTTTATACCATATCCCGATAAAGATTCTGACCAGATTCCAATGGCATATGTAGTGCGGAAGACTGGAAGTAACATATCAGAAAAACAAGTTATGGATTCTGTTGCAAAATAG 204 0.3824 MLIMVVILVNMKDIVMVPPAELEALLLTHPSFIPYPDKDSDQIPMAYVVRKTGSNISEKQVMDSVAK 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00525 67 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 67 - -
Car03g00525 67 SUPERFAMILY Acetyl-CoA synthetase-like 16 67 - -
Car03g00525 67 PANTHER BNAA06G14440D PROTEIN 17 67 - -
Car03g00525 67 Gene3D - 8 67 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00525 Car-Chr3 22883210 22883815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00525 17 67 Monolignol Biosynthesis Gene Families AT1G20500 64.286 2.86e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00525 K10526 - gmx:100811344 76.6405