Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00520 ATGGAAAATGCAAAGGCAAATGAAAATGGTTACAAAATTAACGTAAAGTTAATGAGTGAACCAACATTTGTGCAACCTTATGAAGAAACAAAGAAAGGAATGTATTTCCTATCAAACCTTGACCAAAACATCGCGGTGATAGTTCGAACCGTTTATTGTTTCGAAAAAGCCGAGAAAGGGAATGAGAATTGCTTTGAAGTGATTAAGAATGCATTGAAGAAGgttcttgttgattattatccacttgctgggagattaagtataagtgaagagggtaagttaattgtggattgtacaggggaaggtgctctgtttgttgaggctGAAGCTAATTGTTTAATGGAAGAGATTGGTGATATTACAAAACCTGATCCAAGGACTCTTGGTATGCTTGTTTATGATATTCCTGGTGCTAAACATATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTAACCAAGTTCAAATGTGGAGGTTTTTCTCTTGGACTATGCATGAACCATTGTATGTTTGATGGAATTGGAGCTATGGAGTTTGTGAACTCATGGGGAGAAGTAGCAAGAAATCTACCTCTCTCCATCCCTCCAATTCTCGACCGAAAGATACTCGAGGCGCGAAACCCGCCAAAGATAGAACATTTACATCAAGAATTTGCTGACATTAAAGACAAATCCAACACAAGTAGTTTATATGAAGATGAAATGGTGTATAGATCCTTCTGTTTTGATCCTGAGAAACTAAAAAACCTCAAGAAAAAAGCTATGGAAGATAATGCAATTGAATCTTGCACAACTTTTGAAGTTCTTTCAGCTTTTGTTTGGATTGCAAGAACACAAGCACTTAAAATGTTACCAGAACAAGAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCTAAATTTGAACCAAAACTTCCAAAAGGGTATTTTGGGAATGGAATTGTGTTAACAAATGCGGTTTGTAAAGCAGGTGAAATAACAAATAAGCCCTTGTCATGCACTGTGAAAGTTATTCAAGACGCAATAAAAATGGTAAATGATAGTTACATGAGATCAGCTATTGATTATTTTGAGGTAACAAGAGCTAGGCCTTCTTTGGCATGTACACTTTTGATCACAACTTGGTCTAGGCTTGGTTTTCATACTACTAATTTTGGTTGGGGCGAACCGGTCCTTTCTGGACCGGTTTCGTTGCCGGAAAAGGAAGTGATTTTGTTCCTTTCACATGGACAAGAGAGGAGGAACATTAATGTGCTTCTTGGTTTGCCTGCTCCAGTCATGAAGATATTCCAAGATTTGATGATGCATATTTAG 1311 0.3463 MENAKANENGYKINVKLMSEPTFVQPYEETKKGMYFLSNLDQNIAVIVRTVYCFEKAEKGNENCFEVIKNALKKVLVDYYPLAGRLSISEEGKLIVDCTGEGALFVEAEANCLMEEIGDITKPDPRTLGMLVYDIPGAKHILQMPPLVAQVTKFKCGGFSLGLCMNHCMFDGIGAMEFVNSWGEVARNLPLSIPPILDRKILEARNPPKIEHLHQEFADIKDKSNTSSLYEDEMVYRSFCFDPEKLKNLKKKAMEDNAIESCTTFEVLSAFVWIARTQALKMLPEQETKLLFAVDGRAKFEPKLPKGYFGNGIVLTNAVCKAGEITNKPLSCTVKVIQDAIKMVNDSYMRSAIDYFEVTRARPSLACTLLITTWSRLGFHTTNFGWGEPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMMHI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00520 436 Pfam Transferase family 21 433 - -
Car03g00520 436 Gene3D - 217 435 IPR023213 -
Car03g00520 436 Gene3D - 11 216 IPR023213 -
Car03g00520 436 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 15 434 - -
Car03g00520 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00520 Car-Chr3 22406968 22409075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00520 12 436 Monolignol Biosynthesis Gene Families AT5G48930 34.096 5.44e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00520 K15400 - gmx:100804504 755.362