Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00502 ATGGCGTGTAATAACAAAAGCAACCAAACCACTCCTTCTTTTGTTGCTTTTACTGATGATCAAAGGTTGATTGGTGATGCTGCCAAGAATCAAGCTGCCTCCAACCCTGAAAACACTGTCTTTGATGCTAAGAGGTTAATTGGTACGAAGTTTAGTGACTCTGTTGTTCAAAATGATATTATGTTGTGGCCGTTCAAGGTCATTGCCAGTGTCAATGACAAACCTATGATTAGTGTTAAGTACAAGAGTCAAGAGAAGCAATTTTGTGCCGAGGAAGTTTCATCTATGGTCCTCACGAAGATGCGAGAGACTGCTGAGAAATTTTTGGAATCCCCTGTAAAGAATGTCGTTGTTACTGTACCAGCTTATTTTAGTGATTCTCGGCGAAAAGCCACCATAGATGCTGGTGCCATTGCTGGCCTTAAAGTTATACGGATAATCAATGAACCAACGGCCGCTGCTCTTGCATATGGCCTTGAGAAGAGAACCAATTGTGATGGAGAAAAAAACATTTTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTATCCTAACAATCAATGATAAGGTCTTCCAAGTCAAGGCCACTGGCGGAAACACTCACCTCGGAGGAGAGGACTTTGATAACCGAATGGTCAACTACTTTGTGCAGGAATTCAAGAGGAAGAACAAAGTGGATATTATTGGGAATCCTAGGGCTTTGAGGAGGTTGAGAACTGCGTGCGAAAGGGCAAAAAGGGTACTCTCGTTCGCCGTTGTCACCACTATTGAGGTAGACTCTTTATTTCAAGGCATTGACTTTGTATCATCAATCACTCGTGCTAAGTTTGAAGAAATCAATATAAACATTTTTAATGAGTGTATGAAAACTGTTGAGAGTTGTCTTACTGATGCTAAGATGAACGAGAGTACTATAAATGATGTTGTCCTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGCAACAACTATTACAAGATTTTTTCAAGGGACAAGATCTGTGCATGAGCATCAACCCTGATGAGGCTAAAGCTTATGGTGTTGCTGTCCAGGCTGCTTTGTTGAGTGAAGACTTTAAAAATGTTCCAAATTTGGTGCTGCGAGATGTTACACTGTTGTCTCTTGGTAAGGAAACAATAGGAGATGTCATGACTGTTGTGATTCCTAGGAACACTTGCATTCCCACCAAGAGGACAAAAGAGTTTTGTACAGTTCTTGATAACCAATCCAGTGTCTTGGTTAAGATTTATGAGGGTGAGAGAACAAGAGCCAGTGAAAACAATGAACTTGGTTCTTTTACTCTTTCTAACTTTCCCCTTGCTCCTCGCAACCATCCTTTTGATGTATGTTTTGCTATTGATGCAAATGGTATTTTGACTGTTTCTGCTACAGAAAATTCCACGGGCAATACAAATAAGATTAGAGTAACCAATTACAAAGAAAGGCTATCAACTGAAGAAATTAATAAATTTATTCAGGAAGctgcgttgGAAGCTGAGAGCTACCATGTTGAAGATAAAAAATTCCTAAAGAAAGCTGAAGTAATGAATGCTTTAGATTACTGTGTTTACAAGATACGTAATGCTTTGAAGCAAACAAAGCTTAATTCAAAGATTTCATCTAAGGACAGAGACAAGATCAACTCTGCAATTACAATTGCCACAAATTTGCTTGATAGTAGCCAACAGGTTGAAATTAATGTTCTTGAGGATCAACTGAAGGTGCTTGAGAGTATGTTTAAAAGCTTGAGAGTATGA 1761 0.3913 MACNNKSNQTTPSFVAFTDDQRLIGDAAKNQAASNPENTVFDAKRLIGTKFSDSVVQNDIMLWPFKVIASVNDKPMISVKYKSQEKQFCAEEVSSMVLTKMRETAEKFLESPVKNVVVTVPAYFSDSRRKATIDAGAIAGLKVIRIINEPTAAALAYGLEKRTNCDGEKNIFIFDLGGGTFDVSILTINDKVFQVKATGGNTHLGGEDFDNRMVNYFVQEFKRKNKVDIIGNPRALRRLRTACERAKRVLSFAVVTTIEVDSLFQGIDFVSSITRAKFEEININIFNECMKTVESCLTDAKMNESTINDVVLVGGSSRIPKVQQLLQDFFKGQDLCMSINPDEAKAYGVAVQAALLSEDFKNVPNLVLRDVTLLSLGKETIGDVMTVVIPRNTCIPTKRTKEFCTVLDNQSSVLVKIYEGERTRASENNELGSFTLSNFPLAPRNHPFDVCFAIDANGILTVSATENSTGNTNKIRVTNYKERLSTEEINKFIQEAALEAESYHVEDKKFLKKAEVMNALDYCVYKIRNALKQTKLNSKISSKDRDKINSAITIATNLLDSSQQVEINVLEDQLKVLESMFKSLRV 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00502 586 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 584 - -
Car03g00502 586 Gene3D - 518 584 IPR029048 -
Car03g00502 586 PANTHER HEAT SHOCK PROTEIN 70KDA 4 584 IPR013126 GO:0005524|GO:0140662
Car03g00502 586 SUPERFAMILY Actin-like ATPase domain 3 161 IPR043129 -
Car03g00502 586 Pfam Hsp70 protein 4 580 IPR013126 GO:0005524|GO:0140662
Car03g00502 586 Gene3D - 162 336 - -
Car03g00502 586 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 515 582 IPR029048 -
Car03g00502 586 Coils Coil 567 586 - -
Car03g00502 586 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 361 517 IPR029047 -
Car03g00502 586 Gene3D Actin; Chain A, domain 4 205 288 - -
Car03g00502 586 Gene3D - 4 354 - -
Car03g00502 586 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 362 521 IPR029047 -
Car03g00502 586 ProSitePatterns Heat shock hsp70 proteins family signature 2. 173 186 IPR018181 -
Car03g00502 586 SUPERFAMILY Actin-like ATPase domain 166 357 IPR043129 -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 6 18 - -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 445 461 - -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 28 36 - -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 307 323 - -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 116 136 - -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 339 359 - -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 179 189 - -
Car03g00502 586 PRINTS 70kDa heat shock protein signature 365 384 - -
Car03g00502 586 Gene3D - 41 96 - -
Car03g00502 586 ProSitePatterns Heat shock hsp70 proteins family signature 3. 310 324 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00502 Car-Chr3 21257969 21266469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00502 3 580 Calmodulin-binding Proteins AT3G12580 63.793 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00502 K03283 - gmx:102667578 813.913