Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00501 ATGGCAAACAAATATGAAGGACGTGCAGTGGGAATAGACCTTGGAACAACGTATTCTTGTGTTGCTGTTTGGTTGGAACAACACAGAAGAGTGGAGATTATTCACAATGACCAAGGAAACAGAACCACACCTTCTTTTGTTGCTTTCAATGATGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAAACTGCTTCCAACCCTGAAAACACTGTCTTTGATGCTAAGAGGTTAATCTGTAGGAAGTTTAGTGAACCTGTTGTTCAAAAAGATATAATGTTGTGGCCATTCAAGGTCATTGCCGGTGTGAATGACAAGCCAATGATTAATATTAAGTATAAGGGTCAAGAAAAACAGTTTTGTGCTGAGGAAATATCATCTATGATCCTTACAAAGATGCGAGAGGTTGCAGAGGCATATCTGGGGTCGCCTGTCAAGAATGCCGTTGTTACTGTGCCAGCTTACTTCAATGATTCTCAGCGAAAATCTACCATAGATGCTGGTTCCATTGCTGGCCTTAATGTTATTCGGATAATCAATGAACCTACTGCGGCAGCCATCGCATATAGCCTTGACAAAAGAAATGCTTGTGACGGTAACCGGAATATTTTTGTCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTATCCTCACAATTAAGGGTGATGTCTTTGAAGTAAAAGCTACTGCTGGAAACACTCACCTCGGGGGAGAAGACTTTGATAACAGAATGGTGAACTATTTTGTGGAGGAGTTCAAAAAGAAAAATAAAGTGGACATTAGTGGTAACCCAAGAGCTTTAAGGAGGTTGAGAACTGCGTGCGAGAGGGCAAAAAGGATACTTTCTTTCTCTTTTGTAACCACTGTCGAGGATCTATTGAGAGACTTTTTCAATGGGAAAGATTTGTGCAAAGGTATCAACCCGGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCTATTTTGAGTGATGGATTTAAGAATGTCCCAAACTTGGTGCTGCTAGATGTTACACCATTGTCACTTGGTATCTCAGCAAATGGTAATATCATGGATGTAGTGATTCCTAGGAACACTTCAGTACCTATCACGAAGACAAAAAAATATTATACTGCTATAGATAACCATTGCAGTGTCTCGATTGAAGTTTATGAGGGTGAGAGAGCAAAAGCTAGTGACAACAACCTGCTGGGTTTGTTCATCCTTTCTTGCCTTCCAGGTGCTCCTCGTGGCCAACCTTTGGAGGTATGCTTTTCCATCGATGAAAATGGTATCCTAACTGTTTCTGCAAAGGAAATATCTACTGGCAATACGAATGAGATCACCATATCCAATGACAAAGAAAGATTGTCAACATTGGAAATTCAAAAATTGATTGAAGAAGCTGAGAGCTTCCATGTGGAAGATAAGAAATTTTTATGCAAGGCCAAGGTAATGAATGCTTTGGATTATTGTGTTTACAATATGAAGAATGCTTTAAAGAAGAGGGATGTTAATCTAAAGCTTTCCCCTCAAGAAAGTGAGAAGATCAACAATGCCATTTCGGTGGCCATGAGTTTGCATGCTATGAATAACCAATTGCAAGAAGTTGATGTTCTTGAGGGTCATCTGAAGGAGCTGGAGAGCATGTTGGAAAATCTTGTATCCAAGACTGGCTAG 1665 0.4036 MANKYEGRAVGIDLGTTYSCVAVWLEQHRRVEIIHNDQGNRTTPSFVAFNDDQRLIGDAAKNQTASNPENTVFDAKRLICRKFSEPVVQKDIMLWPFKVIAGVNDKPMINIKYKGQEKQFCAEEISSMILTKMREVAEAYLGSPVKNAVVTVPAYFNDSQRKSTIDAGSIAGLNVIRIINEPTAAAIAYSLDKRNACDGNRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEEFKKKNKVDISGNPRALRRLRTACERAKRILSFSFVTTVEDLLRDFFNGKDLCKGINPDEAVAYGAAVQAAILSDGFKNVPNLVLLDVTPLSLGISANGNIMDVVIPRNTSVPITKTKKYYTAIDNHCSVSIEVYEGERAKASDNNLLGLFILSCLPGAPRGQPLEVCFSIDENGILTVSAKEISTGNTNEITISNDKERLSTLEIQKLIEEAESFHVEDKKFLCKAKVMNALDYCVYNMKNALKKRDVNLKLSPQESEKINNAISVAMSLHAMNNQLQEVDVLEGHLKELESMLENLVSKTG 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00501 554 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Car03g00501 554 PANTHER HEAT SHOCK 70 KDA PROTEIN 287 552 - -
Car03g00501 554 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 291 - -
Car03g00501 554 PANTHER HEAT SHOCK PROTEIN 70KDA 287 552 IPR013126 GO:0005524|GO:0140662
Car03g00501 554 PANTHER HEAT SHOCK PROTEIN 70KDA 4 291 IPR013126 GO:0005524|GO:0140662
Car03g00501 554 SUPERFAMILY Actin-like ATPase domain 198 325 IPR043129 -
Car03g00501 554 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Car03g00501 554 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Car03g00501 554 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 329 480 IPR029047 -
Car03g00501 554 Gene3D - 73 128 - -
Car03g00501 554 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 330 484 IPR029047 -
Car03g00501 554 Coils Coil 525 552 - -
Car03g00501 554 Gene3D - 289 307 - -
Car03g00501 554 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 481 552 IPR029048 -
Car03g00501 554 Pfam Hsp70 protein 9 286 IPR013126 GO:0005524|GO:0140662
Car03g00501 554 Pfam Hsp70 protein 289 551 IPR013126 GO:0005524|GO:0140662
Car03g00501 554 Gene3D - 194 236 - -
Car03g00501 554 Gene3D Actin; Chain A, domain 4 237 288 - -
Car03g00501 554 Gene3D - 10 193 - -
Car03g00501 554 PRINTS 70kDa heat shock protein signature 8 21 - -
Car03g00501 554 PRINTS 70kDa heat shock protein signature 38 50 - -
Car03g00501 554 PRINTS 70kDa heat shock protein signature 60 68 - -
Car03g00501 554 PRINTS 70kDa heat shock protein signature 307 327 - -
Car03g00501 554 PRINTS 70kDa heat shock protein signature 333 352 - -
Car03g00501 554 PRINTS 70kDa heat shock protein signature 413 429 - -
Car03g00501 554 Gene3D - 481 554 IPR029048 -
Car03g00501 554 Gene3D - 308 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00501 Car-Chr3 21234601 21240349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00501 1 552 Calmodulin-binding Proteins AT3G12580 55.987 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00501 K03283 K09490 pcad:102982689 590.112