Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00498 ATGATAATCAATGAACCCACCGCCGCAGCTATTGCATATGGCCTTGACAAAAGAGCTAATTGTGATGAACGGAATATTTTTGTGTTTGATCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTCACCATTAAAGGTAGTGTCTTTGAAGTTAAAGCAACGGCTGGAAACACTCATGTTGGAGGAGAGGACTTTGATAATAGAATGTTGAACTATTTTGTAGAGGAATTTAAGAGGAGGAACAAAGTGGATATTTCTGGGAATCCAAGAGCCTTGAGGCAGTTGAGAACTGCATGTGAAAAGGCAAAAAGGATACTCTCGGTCAAATTTTTAACGTCTGTTGAGATTGATAATTTATTTCAGGGCATTGACTTCTCTTCATCGATAACTCGTTCCAAGTTTGAAGAAATCAATATGGACCTTTTTAATGAGTGTATGAAGACTGTTGAGAGTTGTCTTGCTGATGCTAAGATGGACAAGAGTGGTGTAGATGATATTATACTTGTGGGTGGCTCATCTAGGATTCCCAAAGTGAAGGAACTATTGCGTGATTTCTTCAATGGGAAGGAATTATGCAAGAGCATCAACCCTGATGAAGCTGTTGCTTATGGTGCTGTTGTCCAGGCTGCTTTGTTGAGTGAAGGCTTTAAAAATGTTCCAAATTTGGTGCTGCGAGATGTTACACCGTTGTCTCTTGGTATGTCAACACTAGGAGATGTCATGAATGTGGTGATTCCTAGGAACACTTCCATTCCCACCAAGAGGACAAAAGAGTTTTATACAGTTGTTGATAACCAATCCAGAGTCTTGATTAAGATTTATGAGGGTGAGAGAACAAGAGCCAGTGACAACAATATGCTTGGTTTTTTTAATCTTTCTTGTCTTCCAGGTGCCCCCCGTGGCAATCCTTTGGATGTATCTTTTGCTATCGACGAAAATGGTATTTTAACTGTTTCTGCTAAGGAGATATCCACCGGCAGTACAAATGAAATCACAATAACCAGTGACGAAGAAAGGTTATCCAGAGACGAAATTCAAAAACTGATTCAAGAAGCTGAGTACCATGATGAAGATGTGGAGTTCCTAAAGAAGGCTAAGGTAATGAATGCATTAGATGACTCTGTTTACAAATTGAGGAAGGCTCTAAAGAATAAGGAAGCTAAATTTAAGCTCTCTTCTCAAAAAGTTAGAAAGATCAATCGTGCAATTAAAGTGGCTACAACTTTGCTTGATAAGAAAAAACAGCAGAATGAACTAGATGTTCTTGAGGATCATCTAAAGGAGCTTGAAAGTATGCTGGAAGAtgttggtatcttgacctcgtaa 1323 0.3855 MIINEPTAAAIAYGLDKRANCDERNIFVFDLGGGTFDVSLLTIKGSVFEVKATAGNTHVGGEDFDNRMLNYFVEEFKRRNKVDISGNPRALRQLRTACEKAKRILSVKFLTSVEIDNLFQGIDFSSSITRSKFEEINMDLFNECMKTVESCLADAKMDKSGVDDIILVGGSSRIPKVKELLRDFFNGKELCKSINPDEAVAYGAVVQAALLSEGFKNVPNLVLRDVTPLSLGMSTLGDVMNVVIPRNTSIPTKRTKEFYTVVDNQSRVLIKIYEGERTRASDNNMLGFFNLSCLPGAPRGNPLDVSFAIDENGILTVSAKEISTGSTNEITITSDEERLSRDEIQKLIQEAEYHDEDVEFLKKAKVMNALDDSVYKLRKALKNKEAKFKLSSQKVRKINRAIKVATTLLDKKKQQNELDVLEDHLKELESMLEDVGILTS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00498 440 Gene3D - 18 191 - -
Car03g00498 440 Coils Coil 411 431 - -
Car03g00498 440 Gene3D - 2 209 - -
Car03g00498 440 ProSitePatterns Heat shock hsp70 proteins family signature 2. 28 41 IPR018181 -
Car03g00498 440 Gene3D - 368 436 IPR029048 -
Car03g00498 440 Gene3D Actin; Chain A, domain 4 60 143 - -
Car03g00498 440 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 217 363 IPR029047 -
Car03g00498 440 PANTHER HEAT SHOCK 70 KDA PROTEIN 2 435 - -
Car03g00498 440 PRINTS 70kDa heat shock protein signature 194 214 - -
Car03g00498 440 PRINTS 70kDa heat shock protein signature 300 316 - -
Car03g00498 440 PRINTS 70kDa heat shock protein signature 220 239 - -
Car03g00498 440 PRINTS 70kDa heat shock protein signature 162 178 - -
Car03g00498 440 PRINTS 70kDa heat shock protein signature 34 44 - -
Car03g00498 440 PANTHER HEAT SHOCK PROTEIN 70KDA 2 435 IPR013126 GO:0005524|GO:0140662
Car03g00498 440 SUPERFAMILY Actin-like ATPase domain 22 212 IPR043129 -
Car03g00498 440 Pfam Hsp70 protein 2 435 IPR013126 GO:0005524|GO:0140662
Car03g00498 440 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 216 367 IPR029047 -
Car03g00498 440 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 367 433 IPR029048 -
Car03g00498 440 ProSitePatterns Heat shock hsp70 proteins family signature 3. 165 179 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00498 Car-Chr3 21103738 21105060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00498 2 431 Calmodulin-binding Proteins AT3G12580 62.903 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00498 K03283 - gmx:102667578 603.208