Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00495 ATGGACGCTGGTGCCATTGCTGGCCTAAATGTTATGAAGATAATCAACGAACCCACCGCCGCAGCTATTGCATATGGCCTTGAAAAAATAGCTAATTGTGATGAACGGAATATTTTTGTGTTTGATCTTGGTGGTGGGACTTTTGATGTGTATCTCCTCACCATTAAAGGTAAAGTCTTTGAAGTTAAAGCAACGGCTGGAAACACTCATGTTGGAGGAGAGGACTTTGATAATAGAATGTTGAACTATTTTGTAGAGGAATTTAAGAGGAGGAACAAAGTGGATATTTCTGGGAATCCAAGAGCCTTGAGGCAGTTGAGAACTGCATGTGAAAAGGCAAAAAGGACACTCTCTTTCAAATTGTTAACGTTTGTTGAGATTGATAATTTATTTCAGGGTATTGACTTCTCTTCATCGATCACTCGCGCCAAGTTTGAGGAAATCAATATGGACCTTTTTAATGAGTGTATGAAGACTGTTGAGAGTTGTCTTGCTGATGCTAAGATGGACAAGAGTGGTGTAGATGATATTGTACTTGTGGGTGGCTCATCTAGGATTCCCAAAGTGAAGGAACTATTGCGTGACTTCTTCAATGAGAAGGAATTATGCAAGAGCATCAACCCTGATGAAGCTGTTGCTTATGGTGCCGCTGTCCAGGCTGCTTTGTTGAGTGAAGGCTTTAAAAATGTTCCAAATTTGGTGCTGCGAGATGTTACACCGTTGTCTCTTGGTATGGAAACAATAGGAGATGTCATGAATGTGGTGAATCCTAGGAACACTTCCATTCCCACCAAGATGACAAAAGAATTTTATACAGTTCAGAATAACCAATCCAGTGTCGATATTAAGATTTATGAGGGTGAGAGAACAAGAGCCAGTGACAACAATGAGCTTGGTTTTTTTAATCTTTCTTGTCTTTCAGGTGCTCCCCGTGGCAATCCTTTTAATGCATGCTTTGCTATCGACGAAAATGGTATTTTAACTGATTCTGCTAAGGAGAAATCCACCTGCAATACAAATAAAATCATAATAACCAATGACAAAGAAAGGTTATCCAGAGACGAAATTCAAAAATTGATTCAAGAAGCTAAGGAGTACCATGATGAAGATGTGGAGTTCCTAAAGAAGGCTAAGGTAATGTATGCATTAGATTACTCTGTTTACAAGTTGAGGAATGCTCTAAAGAATAAGGAAGTTAAATTTAAGCTCTCTTCTCAAAAAGTTAGAAAGATCAATCGTGCAATTAAAGTGGCTACAACTTTGCTTGATAAGAATAAACAGCAGAATGAACTAGCTGTTCTTGAGGATCATCTAAAGAAGCTTAATAGTATGCTGGAAGAGGCTAGTTTTGTTTGCAGCAGTGAAGATTTTCAAGTGTTTTCTTGCTTTTGTAAGTGGTGA 1401 0.3854 MDAGAIAGLNVMKIINEPTAAAIAYGLEKIANCDERNIFVFDLGGGTFDVYLLTIKGKVFEVKATAGNTHVGGEDFDNRMLNYFVEEFKRRNKVDISGNPRALRQLRTACEKAKRTLSFKLLTFVEIDNLFQGIDFSSSITRAKFEEINMDLFNECMKTVESCLADAKMDKSGVDDIVLVGGSSRIPKVKELLRDFFNEKELCKSINPDEAVAYGAAVQAALLSEGFKNVPNLVLRDVTPLSLGMETIGDVMNVVNPRNTSIPTKMTKEFYTVQNNQSSVDIKIYEGERTRASDNNELGFFNLSCLSGAPRGNPFNACFAIDENGILTDSAKEKSTCNTNKIIITNDKERLSRDEIQKLIQEAKEYHDEDVEFLKKAKVMYALDYSVYKLRNALKNKEVKFKLSSQKVRKINRAIKVATTLLDKNKQQNELAVLEDHLKKLNSMLEEASFVCSSEDFQVFSCFCKW 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00495 466 PRINTS 70kDa heat shock protein signature 46 56 - -
Car03g00495 466 PRINTS 70kDa heat shock protein signature 174 190 - -
Car03g00495 466 PRINTS 70kDa heat shock protein signature 206 226 - -
Car03g00495 466 PRINTS 70kDa heat shock protein signature 312 328 - -
Car03g00495 466 PRINTS 70kDa heat shock protein signature 232 251 - -
Car03g00495 466 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 448 - -
Car03g00495 466 PANTHER HEAT SHOCK PROTEIN 70KDA 1 448 IPR013126 GO:0005524|GO:0140662
Car03g00495 466 Gene3D - 381 448 IPR029048 -
Car03g00495 466 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 229 381 IPR029047 -
Car03g00495 466 Gene3D - 2 221 - -
Car03g00495 466 SUPERFAMILY Actin-like ATPase domain 34 224 IPR043129 -
Car03g00495 466 Pfam Hsp70 protein 1 446 IPR013126 GO:0005524|GO:0140662
Car03g00495 466 Gene3D - 30 203 - -
Car03g00495 466 SUPERFAMILY Actin-like ATPase domain 2 28 IPR043129 -
Car03g00495 466 Coils Coil 424 444 - -
Car03g00495 466 Gene3D Actin; Chain A, domain 4 72 155 - -
Car03g00495 466 ProSitePatterns Heat shock hsp70 proteins family signature 3. 177 191 IPR018181 -
Car03g00495 466 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 228 380 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00495 Car-Chr3 21027659 21030431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00495 2 444 Calmodulin-binding Proteins AT3G12580 62.332 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00495 K03283 - gmx:102667578 600.897