Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00493 ATGTGGAGCCTTCTATTGGAGCTGATCTTGGCACCAACCTATTCATGTGTTGCTGTGTGGGAGGAGGAAAACAACAGAGCAGAAATCATACACAATGATCAAGGCAACAGAACCACACCTTCTTTTGTTGCTTTCACTGATTCTCAGAGGCTGAGTTGTGGCCCTTTAAGGTCATTGCTGGCAGTGATGACAACTCTGATTGTGGTTAATTTTAAGGGTGAGGAAAAGCGCTTTGTTGCAGAGGAAATATCATCTATAATTGTGTTGCAAGAGAGAAAAAATTTCTTCTTTGATCTCGGTGGTGGAACTTTTGATGTGTCTCTCCTTACTATTAATTAA 339 0.41 MWSLLLELILAPTYSCVAVWEEENNRAEIIHNDQGNRTTPSFVAFTDSQRLSCGPLRSLLAVMTTLIVVNFKGEEKRFVAEEISSIIVLQERKNFFFDLGGGTFDVSLLTIN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00493 112 PANTHER HEAT SHOCK 70 KDA PROTEIN 66 91 - -
Car03g00493 112 PANTHER HEAT SHOCK 70 KDA PROTEIN 10 52 - -
Car03g00493 112 ProSitePatterns Heat shock hsp70 proteins family signature 2. 96 109 IPR018181 -
Car03g00493 112 Gene3D - 10 63 - -
Car03g00493 112 Pfam Hsp70 protein 12 54 IPR013126 GO:0005524|GO:0140662
Car03g00493 112 PRINTS 70kDa heat shock protein signature 4 17 - -
Car03g00493 112 PRINTS 70kDa heat shock protein signature 34 46 - -
Car03g00493 112 PANTHER HEAT SHOCK PROTEIN 70KDA 66 91 IPR013126 GO:0005524|GO:0140662
Car03g00493 112 PANTHER HEAT SHOCK PROTEIN 70KDA 10 52 IPR013126 GO:0005524|GO:0140662
Car03g00493 112 Gene3D - 89 112 - -
Car03g00493 112 PANTHER HEAT SHOCK 70 KDA PROTEIN 90 111 - -
Car03g00493 112 PANTHER HEAT SHOCK PROTEIN 70KDA 90 111 IPR013126 GO:0005524|GO:0140662
Car03g00493 112 SUPERFAMILY Actin-like ATPase domain 13 95 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00493 Car-Chr3 21002923 21003483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00493 10 93 Calmodulin-binding Proteins AT3G12580 40.164 1.48e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00493 K03283 - vra:106774805 82.8037