Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00489 ATGATCCTCACCAAGATGCGGGAGATTGCACATACATTTTTGGAGTCACCGGTTAAAAATGCAGTGATTATTGTACCTGCTTATTTCAACGATTCTCAGAGAAAAGCCGCCAAAGATGTTGATGTTATTGTCGGCCTCAATGTACTAAGGATTATTAATGAACCCACTGCTGCTGCTCTTGCATATGGTCTTCAAATGAGAGCCAATGGTGTTGAAAATAGAAATATTTTCATCTTTGATCTTGGTGGTGGAATTTTTTATGTGTCCTTTTTAACAATTAAGAATAATGTCTTTAATGTCAAGGCCACTGCTGGAGACCCTCACCTTGGAGGAGAGGACTTTGATCACAGGATGATAGATGCTATATCAGAGGGTATTAACTTTTATTCATCGATAGCTCGTGCTAAGTTTGAGCAACTCAATGTGGATCTCTTTGAAAAGTGTATGGAGACATTTGAAAGTTGTCTTATTGATGCTAAAATGCATAAGAATACAGTAGCTGATGTTGTTCTTGTTGGTGGATCTTCTCGGATTCCTAAAGTACAAACTCTATTGCAGGAATTTTTCAATGGAAAAGATCTGTGTTTGAGCATCAACCCTAATGAAGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTATTGAGTGAAGGCATTAAGTCTGTTCCAAATTTGGTGATGCGAGATGTTACACCTTTGTCGCTAGGTACATCGACAAAAGGAGATATCATGAGCGTATTGATTCCAAGGAATTCCACCATTCCTTTCAAGAATAAACAACAATACAGAACATGTGTAGATTACTTGCGTGGTGTCTTAATTAAAGTTTATGAGGGTGAGAGAAAAGTAGCTAGTGAGAATAACTTGCTTGGTTCGTTTATGTGA 885 0.3842 MILTKMREIAHTFLESPVKNAVIIVPAYFNDSQRKAAKDVDVIVGLNVLRIINEPTAAALAYGLQMRANGVENRNIFIFDLGGGIFYVSFLTIKNNVFNVKATAGDPHLGGEDFDHRMIDAISEGINFYSSIARAKFEQLNVDLFEKCMETFESCLIDAKMHKNTVADVVLVGGSSRIPKVQTLLQEFFNGKDLCLSINPNEAVAYGAAVQAALLSEGIKSVPNLVMRDVTPLSLGTSTKGDIMSVLIPRNSTIPFKNKQQYRTCVDYLRGVLIKVYEGERKVASENNLLGSFM 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00489 294 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 215 294 IPR029047 -
Car03g00489 294 Pfam Hsp70 protein 123 293 IPR013126 GO:0005524|GO:0140662
Car03g00489 294 ProSitePatterns Heat shock hsp70 proteins family signature 3. 169 183 IPR018181 -
Car03g00489 294 PRINTS 70kDa heat shock protein signature 210 226 - -
Car03g00489 294 PRINTS 70kDa heat shock protein signature 21 41 - -
Car03g00489 294 PRINTS 70kDa heat shock protein signature 84 94 - -
Car03g00489 294 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 222 293 IPR029047 -
Car03g00489 294 SUPERFAMILY Actin-like ATPase domain 72 216 IPR043129 -
Car03g00489 294 Gene3D Actin; Chain A, domain 4 123 147 - -
Car03g00489 294 Gene3D - 1 75 - -
Car03g00489 294 Gene3D - 148 195 - -
Car03g00489 294 Gene3D - 76 122 - -
Car03g00489 294 PANTHER HEAT SHOCK 70 KDA PROTEIN 119 293 - -
Car03g00489 294 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 120 - -
Car03g00489 294 PANTHER HEAT SHOCK PROTEIN 70KDA 119 293 IPR013126 GO:0005524|GO:0140662
Car03g00489 294 PANTHER HEAT SHOCK PROTEIN 70KDA 1 120 IPR013126 GO:0005524|GO:0140662
Car03g00489 294 Gene3D - 196 213 - -
Car03g00489 294 SUPERFAMILY Actin-like ATPase domain 1 65 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00489 Car-Chr3 20957863 20958885 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00489 1 293 Calmodulin-binding Proteins AT3G12580 58.824 6.60e-133 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00489 K03283 - gmx:102667572 379.022