Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00487 ATGGCCAAAAAGTATGCGGGACCTGCTATTGGAATTGACCTTGGCACAACCTATTCATGTGTTGCTGTATGGCAAGAGCAAAACAACAGAGCAGAAATCATACACAATGATCAAGGCAACAGAACTACACCTTCTTTTGTTGCTTTCACTGATTCTCAAAGGCTAATTGGTGATGCTGCTAAAAATCAAGCTGCTTCAAACCCAGCCAACACTATCTTTGATGCAAAGAGGTTGATTGGAAGAAAATACAGTGATTCTGTTATTAAAACTGATCTGCAGTTGTGGCCTTTTAAGGTCATTGCTGACACCAATGACAATCCTGTGATTGTTGTTAATTTTAAGGATGAGGAAAAACGCTTTGTTGCAGAGGAAATATCATCTATGATCCTCACCAAGATGCGGGAGATTGCACAGAAATTTTTGGAGACACCGGTTAAAAATGCAGTGATTACTGTTCCTGCTTATTTCAATGATTCTCAGAGAAAAGCCACCAAAGATGCTGGTTCTATTGCCGGCCTCAATGTAATAAGGATTATTAATGAACCAACTGCTGCTGCTCTTGCTTATGGTCTTCAAAAGAGAGCCAACTGTGATGAAAGTAAAAATATTTTCATCTTTGATCTTGGTGGTGGAACTTTTGATGTGTCTCTTCTCACAATTAAGAATAATGTGTTTGATGTCAAGGCCACTGCTGGAGACACTCACCTTGGAGGAGAAGACTTTGATCACAGAATGGTAAACCACTTTGTCAAGGAGTTCAAAAGGAAGCATAACAAGGACATTAGTGGAAACTCAAGGGCCCTTAGAAGGTTGAGAACTGCTTGTGAGAGAGCAAAAAGGACACTTTCATTCGACATGGAGGCCATAATTGATATAGATGCTATATCGGAGGGCATTGACTTTTGTTCATCGATTACTCGTGCTAAGTTTGAGAGCCTCAATGTAGACCTCTTTGAAAAGTGTATGGAAACAGTTAAAAGTTGTCTTACTGATGCTAAAATGCAAAAGAATGCTGTAGATGATGTTGTTCTTGTTGGTGGGTCTTCTCGGATTCCTAAAGTACAAACTCTATTACAGGAATTTTTCAATGGAAAAGATCTATGTTTGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCAGTCCAGGCTGCTTTATTGGGTGAAGGCATCAAATCTGTTTCAAACTTGGTGCTGCGAGATGTTACACCATTGTCGCTTGGTATATCGACAAAAGGAGATATCATGAGTGTGTTGATTCCAAGGAATTCCACCATTCCTGTCAAGAAGGAACAACAATACCAAACAGTTGAAGATGACCAACCTGCTGTTTCAATTGATGTTTATGAGGGTGAGAGAGAAGTAGCTAGTGAGAATAACTTGCTTGGTTTGTTTACTCTCTCGCTTCCTCTCGCACCACGCGGCCTTCCAGTCAATGTATGCTTTGCTATCGATGCTGATGGTATATTAAATGTTTCTGCTGAGGAAGTAACAAGTGGGAATAAGAAAGATATTACAATAACAAAAGATAATGGTAGGCTATCAACCGAAGAGATTGAGAGAATGATTCAAGAAGCTGGGAAATTCAAAGATGAAGACAAGAAATTTGTGAAGAAAGTTAAAGCAATGAATGCCGTGGAAGACTATATTTATAACATGAGGAAAGTTATGAAGGATGATGGTATTACTTCCATGCTTAACTCAATAGACAAAATGAAGATCAATTCTGCAATGATAAAGGGAAAGAAATTGATTGATAGCAACAACCAGCAGCAAGAAACGTGTGTGTTTGTGGATTTTCTGAGGGAGCTTGAGAGTATCTTTGAATCTGCTTTGAACAAAATCAACAAAGGTTACTGTGCTGAGGAAAGTTATTCTGATTCTGATTGA 1893 0.392 MAKKYAGPAIGIDLGTTYSCVAVWQEQNNRAEIIHNDQGNRTTPSFVAFTDSQRLIGDAAKNQAASNPANTIFDAKRLIGRKYSDSVIKTDLQLWPFKVIADTNDNPVIVVNFKDEEKRFVAEEISSMILTKMREIAQKFLETPVKNAVITVPAYFNDSQRKATKDAGSIAGLNVIRIINEPTAAALAYGLQKRANCDESKNIFIFDLGGGTFDVSLLTIKNNVFDVKATAGDTHLGGEDFDHRMVNHFVKEFKRKHNKDISGNSRALRRLRTACERAKRTLSFDMEAIIDIDAISEGIDFCSSITRAKFESLNVDLFEKCMETVKSCLTDAKMQKNAVDDVVLVGGSSRIPKVQTLLQEFFNGKDLCLSINPDEAVAYGAAVQAALLGEGIKSVSNLVLRDVTPLSLGISTKGDIMSVLIPRNSTIPVKKEQQYQTVEDDQPAVSIDVYEGEREVASENNLLGLFTLSLPLAPRGLPVNVCFAIDADGILNVSAEEVTSGNKKDITITKDNGRLSTEEIERMIQEAGKFKDEDKKFVKKVKAMNAVEDYIYNMRKVMKDDGITSMLNSIDKMKINSAMIKGKKLIDSNNQQQETCVFVDFLRELESIFESALNKINKGYCAEESYSDSD 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00487 630 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Car03g00487 630 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 8 21 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 38 50 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 60 68 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 148 168 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 211 221 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 339 355 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 371 391 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 397 416 - -
Car03g00487 630 PRINTS 70kDa heat shock protein signature 476 492 - -
Car03g00487 630 Gene3D - 73 128 - -
Car03g00487 630 Gene3D - 544 618 IPR029048 -
Car03g00487 630 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Car03g00487 630 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 543 IPR029047 -
Car03g00487 630 Gene3D - 194 368 - -
Car03g00487 630 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Car03g00487 630 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 617 - -
Car03g00487 630 PANTHER HEAT SHOCK PROTEIN 70KDA 5 617 IPR013126 GO:0005524|GO:0140662
Car03g00487 630 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 548 IPR029047 -
Car03g00487 630 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Car03g00487 630 Gene3D Actin; Chain A, domain 4 237 320 - -
Car03g00487 630 Gene3D - 10 386 - -
Car03g00487 630 Pfam Hsp70 protein 9 592 IPR013126 GO:0005524|GO:0140662
Car03g00487 630 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 617 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00487 Car-Chr3 20914555 20916785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00487 1 619 Calmodulin-binding Proteins AT3G12580 66.720 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00487 K03283 - gmx:102667578 814.298