Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00486 ATGTCAACAAAATATGAGGGAATTGCAATAGGAATTGATCTCGGCACTACTTATTCATGTGTTGGAGTATGGCAGGATCAAACTGATCGTGTGGAAATCATTCACAATGATCAAGGAAACAAAACAACTCCTTCTTGTGTTGCTTTCACTAACTCTCAGAGATTGATTGGTGATGCTGCCAAAAATCAAGCTTCCTCAAACCCAACCAACACTATATTTGATGTAAAAAGGTTGATTGGAAGGAAATATAGTGATTCTGTTATTAAAAATGATCTACAGTTGTGGCGCTTTAAGGTCATTGCTGGCAGTGATGACAACCCTGTGATTGTTGTTAATTTTAAGGGTGAGGAAAAGCGCTTTGTTGCAGAGGAAATATCATCTATGGTCCTCACAAAGATGCGGGAGATTGCAGAGGTATTCTTGGAGTCATCTGTCAAAAATGCAGTGATTACGGTACCAGCTTATTTCAATGATTCACAGCGAAGAGCCACCAAAGATGCTGGTTTCATTGCTGGCCTCAATGTAATACGGATAATCAATGAGCCTACTGCTGCTGCTCTTGCATATGGTCTTCAAAAGAGAGCAAATTGTGTTGAGGAGAGAAAAAATTTCATCTTTGATCTTGGTGGTGGAACTTTTGATGTGTCTCTCCTTACAATAAAGAATAATGCCTTTGAAGTCAAGGCCACTGCCGGAGACACTCACCTTGGGGGAGAGGACTTTGATAATCGGATGCTGAATTATTTTGTGAATGAGTTGAAGAGGAAAAAAACAAAGTTGACATTAGTGGAAACTCAAAAGCCCTGA 807 0.3978 MSTKYEGIAIGIDLGTTYSCVGVWQDQTDRVEIIHNDQGNKTTPSCVAFTNSQRLIGDAAKNQASSNPTNTIFDVKRLIGRKYSDSVIKNDLQLWRFKVIAGSDDNPVIVVNFKGEEKRFVAEEISSMVLTKMREIAEVFLESSVKNAVITVPAYFNDSQRRATKDAGFIAGLNVIRIINEPTAAALAYGLQKRANCVEERKNFIFDLGGGTFDVSLLTIKNNAFEVKATAGDTHLGGEDFDNRMLNYFVNELKRKKTKLTLVETQKP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00486 268 Gene3D - 10 193 - -
Car03g00486 268 Gene3D - 73 128 - -
Car03g00486 268 Pfam Hsp70 protein 9 258 IPR013126 GO:0005524|GO:0140662
Car03g00486 268 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 258 - -
Car03g00486 268 Gene3D Actin; Chain A, domain 4 237 263 - -
Car03g00486 268 Gene3D - 194 236 - -
Car03g00486 268 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Car03g00486 268 PRINTS 70kDa heat shock protein signature 211 221 - -
Car03g00486 268 PRINTS 70kDa heat shock protein signature 38 50 - -
Car03g00486 268 PRINTS 70kDa heat shock protein signature 148 168 - -
Car03g00486 268 PRINTS 70kDa heat shock protein signature 60 68 - -
Car03g00486 268 PRINTS 70kDa heat shock protein signature 8 21 - -
Car03g00486 268 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Car03g00486 268 SUPERFAMILY Actin-like ATPase domain 200 260 IPR043129 -
Car03g00486 268 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Car03g00486 268 PANTHER HEAT SHOCK PROTEIN 70KDA 4 258 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00486 Car-Chr3 20888007 20889490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00486 1 259 Calmodulin-binding Proteins AT5G02500 73.745 3.03e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00486 K03283 - gmx:102667578 398.667