Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00475 ATGGTCTTCCCCTCCCTTCCAATTTATCTAGATCCAACCAACTGGTCACAACGGCAAGCAAGAATTGAGATTGGCACCCAAAATTCATTACCTTTGCAGCTACCACCTGCTTCAACTGTAGCTTCAACTGTAACTGCTGAAGCTGGTGGTAGCTACCAAGGGTTTATAAGGCCAGGATCAATGGCCGATCGAGCTAGGATGTCAAAGATACACCAAAATGAAGTTGCTGCAGCACAAAAATGTCCAAGATGTGAATCAACAAACACCAAGTTTTGCTACTACAACAACTACAATCTTTCGCAGCCGCGTCATTTTTGCAAAACTTGTCGTCGGTATTGGACTAGAGGAGGTACACTTAGAAACGTTCCGGTTGGAGGTGGTTGTAGAAGAAACAAAAGAAGCAAAGTTAATTCAATATCAAAATCATCAACTTCAAAACCTAATCATGATCATCGCTCGGTCGGTACCGGTGTTGTTGCTGGTGTTGGTGGTTCTAGCTCAACTGGTGCAAATGCTTCTTCTAATAATGGATGCATTGATTCTAATGTGAATGTGGGAATGGCTCATTTTCAAACTCAATTTCCATTTTTGTCCTCTTTGAATCATTTTAACAACAATGACTATGTTTCTGGGGGAATTGGTTCATTGATGGCCAAAAATATTAGCAATAGTACAACTACAAGTGTTGAGTTTCAACTTGGTAATGGTTCATCACTTGGTAATAGTAATGTTGGATCATTGTTTTTATCAAATGGTATTGGTGAACAATGGAGGTTTTCGAATCCGGAACAAGTtcatcatcatcctcatcaacaacaacaacaacaacaacgaaatcaacaaTTTCCTTTCTTGACAAATTTGGAACCACAAATTGGGTTGTTTCAATTTGGTAGTGGAGAAAATAATGAACCTCCAACAAGTTTTATTCATTCTAAGGCTATCGATTCTTCAAGTGTTGGTATTGGAACGATCCCTCAAGTGAACAATATAAAAATGGAAGAAAATAATCATCAAGTGTTGAGTTTGCCAAAGAATCTTTTGAGTGGTTCAggaaatagtaatgatatattttggaatggaaatggtaatagtaatgcaaatgCATGGAATAATGAAGTTCCTAGTTTCACTCCATCACCAAGTCAATTATTATGA 1158 0.3523 MVFPSLPIYLDPTNWSQRQARIEIGTQNSLPLQLPPASTVASTVTAEAGGSYQGFIRPGSMADRARMSKIHQNEVAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGTLRNVPVGGGCRRNKRSKVNSISKSSTSKPNHDHRSVGTGVVAGVGGSSSTGANASSNNGCIDSNVNVGMAHFQTQFPFLSSLNHFNNNDYVSGGIGSLMAKNISNSTTTSVEFQLGNGSSLGNSNVGSLFLSNGIGEQWRFSNPEQVHHHPHQQQQQQQRNQQFPFLTNLEPQIGLFQFGSGENNEPPTSFIHSKAIDSSSVGIGTIPQVNNIKMEENNHQVLSLPKNLLSGSGNSNDIFWNGNGNSNANAWNNEVPSFTPSPSQLL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00475 385 MobiDBLite consensus disorder prediction 124 155 - -
Car03g00475 385 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
Car03g00475 385 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 26 360 - -
Car03g00475 385 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 360 IPR045174 GO:0003700|GO:0006355
Car03g00475 385 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Car03g00475 385 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00475 Car-Chr3 20176239 20178239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00475 1 135 C2C2-Dof Transcription Factor Family AT2G37590 47.853 2.32e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car03g00475 zf-Dof 3.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00475 - - cam:101502096 664.84